Pemetrexed - ≥99% , GAR transformylase inhibitor, CAS No.150399-23-8, GAR transformylase inhibitor

CAS: 150399-23-8 Cat. No.: P129841 Molecular Weight: 471.37 EC Number: 604-733-2

GRADE & PURITY ≥99%

Synonyms

CAS-150399-23-8 | Pemetrexed Disodium is known as a Thymidylate synthase inhibitor. | PEMETREXED DISODIUM [USP MONOGRAPH] | AC-1326 | EX-A836 | s1135 | UNII-2PKU919BA9 | LY231514 disodium | HMS1791H16 | L-Glutamic acid, N-(4-(2-(2-amino-4,7-dihydro-4-oxo-

Storage

Store at -20°C

Shipped In

Ice chest + Ice pads

Overview

An inhibitor of TS, DHFR and GARFT.

Specifications

Synonyms

CAS-150399-23-8 | Pemetrexed Disodium is known as a Thymidylate synthase inhibitor. | PEMETREXED DISODIUM [USP MONOGRAPH] | AC-1326 | EX-A836 | s1135 | UNII-2PKU919BA9 | LY231514 disodium | HMS1791H16 | L-Glutamic acid, N-(4-(2-(2-amino-4, 7-dihydro-4-oxo-

Specifications & Purity

≥99%

Biochemical and Physiological Mechanisms

Antifolate agent. Folic acid analog. Competitive thymidylate synthase, dihydrofolate reductase and glycinamide ribonucleotide formyltransferase inhibitor. Shows potent activity against CNS malignancies in vivo.

Storage

Store at -20°C

Shipped In

Ice chest + Ice pads

This product requires cold chain shipping. Ground and other economy services are not available.

Action Type

INHIBITOR

Mechanism of action

GAR transformylase inhibitor

Note

Wherever possible, you should prepare and use solutions on the same day. However, if you need to make up stock solutions in advance, we recommend that you store the solution as aliquots in tightly sealed vials at -20°C. Generally, these will be useable for up to one month. Before use, and prior to opening the vial we recommend that you allow your product to equilibrate to room temperature for at least 1 hour. Need more advice on solubility, usage and handling? Please visit our frequently asked questions (FAQ) page for more details.

Purity

≥99%

Names and Identifiers

• Pubchem Sid: 504773286
• Pubchem Sid Url: https://pubchem.ncbi.nlm.nih.gov/substance/504773286
• Canonical Smiles: C1=CC(=CC=C1CCC2=CNC3=C2C(=O)NC(=N3)N)C(=O)NC(CCC(=O)[O-])C(=O)[O-].[Na+].[Na+]
• IUPAC Name: disodium;(2S)-2-[[4-[2-(2-amino-4-oxo-3,7-dihydropyrrolo[2,3-d]pyrimidin-5-yl)ethyl]benzoyl]amino]pentanedioate
• InChIKey: NYDXNILOWQXUOF-GXKRWWSZSA-L
• INCHI: 1S/C20H21N5O6.2Na/c21-20-24-16-15(18(29)25-20)12(9-22-16)6-3-10-1-4-11(5-2-10)17(28)23-13(19(30)31)7-8-14(26)27;;/h1-2,4-5,9,13H,3,6-8H2,(H,23,28)(H,26,27)(H,30,31)(H4,21,22,24,25,29);;/q;2*+1/p-2/t13-;;/m0../s1
• Isomeric SMILES: C1=CC(=CC=C1CCC2=CNC3=C2C(=O)NC(=N3)N)C(=O)N[C@@H](CCC(=O)[O-])C(=O)[O-].[Na+].[Na+]
• Molecular Weight: 471.37
• Reaxy-Rn: 19326742
• Reaxys-RN_link_address: https://www.reaxys.com/reaxys/secured/hopinto.do?context=S&query=IDE.XRN=19326742&ln=

Taxonomic Classification

Taxonomy Tree

• Kingdom Organic compounds
  • Superclass Organic acids and derivatives
    • Class Carboxylic acids and derivatives
      • Subclass Amino acids, peptides, and analogues
        • Level5 Amino acids and derivatives
          • Level6 Alpha amino acids and derivatives
            • Level7 Glutamic acid and derivatives

• Kingdom: Organic compounds
• Superclass: Organic acids and derivatives
• Class: Carboxylic acids and derivatives
• Subclass: Amino acids, peptides, and analogues
• Intermediate Tree Nodes: Amino acids and derivatives - Alpha amino acids and derivatives
• Direct Parent: Glutamic acid and derivatives
• Alternative Parents: Hippuric acids N-acyl-alpha amino acids Pyrrolo[2,3-d]pyrimidines Benzoyl derivatives Aminopyrimidines and derivatives Pyrimidones Substituted pyrroles Dicarboxylic acids and derivatives Vinylogous amides Heteroaromatic compounds Amino acids Secondary carboxylic acid amides Carboxylic acid salts Carboxylic acids Azacyclic compounds Organic zwitterions Organopnictogen compounds Carbonyl compounds Primary amines Organic sodium salts Hydrocarbon derivatives Organic oxides
• Molecular Framework: Aromatic heteropolycyclic compounds
• Substituents: Glutamic acid or derivatives - N-acyl-alpha amino acid or derivatives - N-acyl-alpha-amino acid - Hippuric acid - Hippuric acid or derivatives - Benzamide - Pyrrolo[2,3-d]pyrimidine - Benzoic acid or derivatives - Pyrrolopyrimidine - Benzoyl - Aminopyrimidine - Pyrimidone - Monocyclic benzene moiety - Pyrimidine - Substituted pyrrole - Benzenoid - Dicarboxylic acid or derivatives - Pyrrole - Vinylogous amide - Heteroaromatic compound - Amino acid - Secondary carboxylic acid amide - Carboxamide group - Carboxylic acid salt - Azacycle - Organic alkali metal salt - Carboxylic acid - Organoheterocyclic compound - Organic salt - Organic oxygen compound - Organic sodium salt - Organic nitrogen compound - Amine - Carbonyl group - Hydrocarbon derivative - Organic oxide - Organopnictogen compound - Organic zwitterion - Primary amine - Organonitrogen compound - Organooxygen compound - Aromatic heteropolycyclic compound
• Description: This compound belongs to the class of organic compounds known as glutamic acid and derivatives. These are compounds containing glutamic acid or a derivative thereof resulting from reaction of glutamic acid at the amino group or the carboxy group, or from the replacement of any hydrogen of glycine by a heteroatom.
• External Descriptors: organic sodium salt

Data sources

1. Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS. ClassyFire: Automated Chemical Classification With A Comprehensive, Computable Taxonomy. Journal of Cheminformatics, 2016, 8:61.

DOI: 10.1186/s13321-016-0174-y

Associated Targets(Human)

TYMS Tclin Thymidylate synthase (1651 Activities)

Discover Target: TYMS

Activity Type	Relation	Activity value	Units	Action Type	Journal	PubMed Id	doi	Assay Aladdin ID

BGC-823 (3035 Activities)

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HL-60 (67320 Activities)

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OVCAR-3 (48710 Activities)

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SGC-7901 (2773 Activities)

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A549 (127892 Activities)

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HepG2 (196354 Activities)

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SMMC-7721 (5516 Activities)

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TDP1 Tchem Tyrosyl-DNA phosphodiesterase 1 (345557 Activities)

Discover Target: TDP1

Activity Type	Relation	Activity value	Units	Action Type	Journal	PubMed Id	doi	Assay Aladdin ID

GES1 (603 Activities)

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L02 (4864 Activities)

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Associated Targets(non-human)

rep Replicase polyprotein 1ab (378 Activities)

Discover Target: rep

Activity Type	Relation	Activity value	Units	Action Type	Journal	PubMed Id	doi	Assay Aladdin ID

Mechanisms of Action

Chemical and Physical Properties

• Solubility: DMSO Water 94 mg/mL Ethanol
• Molecular Weight: 471.400 g/mol
• Hydrogen Bond Donor Count: 4
• Hydrogen Bond Acceptor Count: 7
• Rotatable Bond Count: 7
• Exact Mass: 471.113 Da
• Monoisotopic Mass: 471.113 Da
• Topological Polar Surface Area: 193.000 Ų
• Heavy Atom Count: 33
• Formal Charge: 0
• Complexity: 737.000
• Isotope Atom Count: 0
• Defined Atom Stereocenter Count: 1
• Undefined Atom Stereocenter Count: 0
• Defined Bond Stereocenter Count: 0
• Undefined Bond Stereocenter Count: 0
• The total count of all stereochemical bonds: 0
• Covalently-Bonded Unit Count: 3

XLogP3

References

1. Shuojiong Pan, Tianyu Li, Yizheng Tan, Huaping Xu.  (2021)  Selenium-containing nanoparticles synergistically enhance Pemetrexed&NK cell-based chemoimmunotherapy.  BIOMATERIALS,      [PMID:34922271] [10.1016/j.biomaterials.2021.121321]

2. Kui Wang, Qi-Qi Wang, Mi-Ni Wang, Siyang Xing, Bolin Zhu, Ze-Hao Zhang.  (2019)  Supramolecular Amphiphilic Assembly Formed by the Complexation of Calixpyridinium with Alimta.  LANGMUIR,      [PMID:31203624] [10.1021/acs.langmuir.9b01336]