2-[2-(2-Azidoethoxy)ethoxy]ethanol solution - ~0.5M in tert-butyl methyl ether , CAS No.86520-52-7

CAS: 86520-52-7 Cat. No.: A462927 Fórmula: C6H13N3O3 Peso molecular: 175.19 Beilstein Registry Number: 4418543 Número CE: 694-430-1
Disponível para encomenda
GRADE & PURITY ~0.5M in tert-butyl methyl ether
Synonyms
1-Azido-8-hydroxy-3,6-dioxaoctane | SCHEMBL214423 | Ethanol, 2-[2-(2-azidoethoxy)ethoxy]- | 2-(2-(2-azidoethoxy)ethoxy)ethan-1-ol | BP-20693 | 8-Azido-3,6-dioxaoctanol | 2-(2-(2-AZIDOETHOXY)ETHOXY)ETHANOL | LCZC464 | ZB0973 | 5-Pentylpent-2-en-5-olide | G
Storage
Store at 2-8°C
Shipped In
Wet ice
★
Size
USA
Alemanha (EU)*
Price
Qty
10ml
A462927-10ml
Sob encomenda · 8–12 semanas

564,90US$

659,90US$
Gravar 95,00 US$ (14.40%)
Enter a quantity for the sizes you want to add.
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Why this grade

~0.5M in tert-butyl methyl ether for sensitive chromatographic and analytical workflows requiring minimal baseline interference.

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Storage & shipping

Store at 2-8°C Ships Wet ice Check lot-specific COA for exact specifications.

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Quality documents

SDS, COA, datasheet, and spec sheet available for download. Lot-specific COA accessible via lot number lookup.

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Literature proof

Cited in 0 peer-reviewed publications across chromatography, organic synthesis, and cross-coupling reactions.

Specifications

Sinónimos
1-Azido-8-hydroxy-3,6-dioxaoctane | SCHEMBL214423 | Ethanol, 2-[2-(2-azidoethoxy)ethoxy]- | 2-(2-(2-azidoethoxy)ethoxy)ethan-1-ol | BP-20693 | 8-Azido-3,6-dioxaoctanol | 2-(2-(2-AZIDOETHOXY)ETHOXY)ETHANOL | LCZC464 | ZB0973 | 5-Pentylpent-2-en-5-olide | G
Especificações e pureza
~0.5M in tert-butyl methyl ether
Condições de armazenamento de armazenamento
Store at 2-8°C
Enviado em
Wet ice
Este produto requer transporte de cadeia fria. Serviços terrestres e outros serviços econômicos não estão disponíveis.
Nomes e identificadores
Sorrisos canónicosC(COCCOCCO)N=[N+]=[N-]
IUPAC Name2-[2-(2-azidoethoxy)ethoxy]ethanol
InChIKeyPMNIHDBMMDOUPD-UHFFFAOYSA-N
INCHI1S/C6H13N3O3/c7-9-8-1-3-11-5-6-12-4-2-10/h10H,1-6H2
SMILES isoméricas C(COCCOCCO)N=[N+]=[N-]
WGK Alemanha 3
Peso molecular 175.19
Beilstein 4418543
Reaxy-Rn 4418543
Reaxys-RN_link_address https://www.reaxys.com/reaxys/secured/hopinto.do?context=S&query=IDE.XRN=4418543&ln=

Documentation

📋 Safety Data Sheet (SDS)

Comprehensive hazard, handling, storage, and regulatory compliance document.

Download SDS →

✅ Certificate of Analysis (COA)

Lot-specific quality data. Enter your lot number to retrieve the exact COA.

Look up COA →

📊 Datasheet

Quick-reference summary of product specifications and applications.

View datasheet →

🔬 Specification Sheet

Full quality attributes and acceptance criteria for this grade.

View spec sheet →

Advanced Data

Taxonomic Classification

Taxonomy Tree

KingdomOrganic compounds
SuperclassOrganic 1,3-dipolar compounds
ClasseAllyl-type 1,3-dipolar organic compounds
SubclassAzo imides
Intermediate Tree Nodes Not available
Direct ParentAzo imides
Alternative Parents Azo compounds  Dialkyl ethers  Primary alcohols  Organopnictogen compounds  Organic zwitterions  Organic salts  Hydrocarbon derivatives  
Molecular FrameworkAliphatic acyclic compounds
Substituents Azo imide - Azo compound - Ether - Dialkyl ether - Organic nitrogen compound - Organic oxygen compound - Organopnictogen compound - Hydrocarbon derivative - Organic salt - Organic zwitterion - Primary alcohol - Organooxygen compound - Organonitrogen compound - Alcohol - Aliphatic acyclic compound
DescriçãoThis compound belongs to the class of organic compounds known as azo imides. These are n-Imides of azo compounds, analogous to azoxy compounds, having a delocalized structure.
External Descriptors Not available
Estrutura 3D
Modelo de Estrutura Química Interativa





Certificados(CoA,COO,BSE/TSE e Mapa de Análise)
C of A & Other Certificates(BSE/TSE, COO):
Analytical Chart:
Propriedades químicas e físicas
Peso molecular175.190 g/mol
XLogP30.200
Hydrogen Bond Donor Count1
Hydrogen Bond Acceptor Count5
Rotatable Bond Count8
Exact Mass175.096 Da
Monoisotopic Mass175.096 Da
Topological Polar Surface Area53.100 Ų
Heavy Atom Count12
Formal Charge0
Complexity136.000
Isotope Atom Count0
Defined Atom Stereocenter Count0
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
The total count of all stereochemical bonds0
Covalently-Bonded Unit Count1
Calculadoras de soluções
Revisões

Avaliações dos Clientes

Application Protocols

No vendor-validated analytical or bioassay protocols are provided for this item. Typical uses follow standard literature procedures:

  • CuAAC/SPAAC ligations for installing triazole-linked tags or conjugates on alkynyl partners (see Reaction Conditions tab for starting parameters).
  • Alcohol activation (tosylation/mesylation) followed by substitution or coupling to surfaces/polymers.

For step-by-step instructions tailored to your system (substrate loadings, solvent system compatibility with the supplied solution, and purification), consult peer-reviewed protocols and adjust based on the CoA-disclosed concentration and solvent.

Biological Roles
  • Item-specific: This product is supplied for research use only. No biological role is claimed for the material itself.

  • Literature context (not product claims)

    • The compound functions as a chemical handle rather than a metabolite. The terminal azide is bioorthogonal—generally absent from native biochemistry—making it valuable for labeling and conjugation strategies in chemical biology.
    • The primary alcohol and PEG-like spacer contribute to water compatibility and can reduce nonspecific binding when incorporated into probes or surfaces.
    • In bioconjugation workflows, azides are introduced into biomolecules (or materials) followed by click to alkynes, enabling installation of fluorophores, affinity tags, or other functional units. The alcohol can be used for upstream attachment (e.g., carbonate linkage) to carriers or scaffolds.
  • Safety note in bio-context

    • Although frequently used in bioorthogonal chemistry, this reagent is not intended for in vivo use or therapeutic applications. Handle per SDS and institutional safety practices.
Buffer Applications

This compound is not a buffering agent and is not used to establish or maintain pH. However, its azide functionality supports bioorthogonal ligations that can be carried out in common buffers.

  • Literature guidance
    • SPAAC reactions proceed efficiently in neutral aqueous buffers (e.g., PBS, HEPES, pH ~7.2–7.5), often with 0–20% DMSO for solubilization when needed.
    • CuAAC can be executed in buffered aqueous/organic mixtures (e.g., phosphate buffer with t-BuOH or EtOH) using CuSO4/sodium ascorbate; maintain pH near neutral to protect sensitive partners.

For buffer recipes, ionic strength, and compatibility with specific biomolecules, optimize empirically; confirm the supplied solution solvent to ensure miscibility with the chosen buffer.

Green Alternatives

Because 2-[2-(2-azidoethoxy)ethoxy]ethanol is a specialized reagent rather than a process solvent, greener practice focuses on media and catalysts for its key transformations.

  • Greener media choices (literature)

    • Favor water or water/alcohol mixtures for CuAAC and SPAAC where solubility permits. Ethanol/water often provides an effective, low-toxicity alternative to DMF or DMSO.
    • Use bio-derived solvents (2-MeTHF, Cyrene) for alcohol derivatizations when compatible with reagents; however, ensure azide stability and reagent solubility.
  • Catalyst considerations (literature)

    • CuAAC: employ catalytic copper with ligand accelerators (e.g., THPTA) to minimize copper loading; recover copper by chelation/scavenging.
    • SPAAC eliminates copper altogether but uses strained alkynes; balance reduced metal use against the footprint of strained-alkyne synthesis.
  • Waste and safety

    • Avoid concentrating azide-containing waste; keep aqueous/organic residues diluted and quenched appropriately (consult institutional guidelines).

Comparison snapshot (literature; qualitative)

  • Aqueous EtOH vs DMF for CuAAC
    • Pros: lower toxicity, easier workup, better EHS profile
    • Trade-offs: sometimes slower kinetics; may require ligand optimization
  • SPAAC vs CuAAC
    • Pros: metal-free, biocompatible
    • Trade-offs: cost/availability of strained alkynes; occasionally slower or less selective without guidance from copper ligation chemistry
Pharmaceutical Uses

No excipient or pharmacopeial status is specified for this item; it is supplied for research use only.

  • Literature context (non-clinical)

    • PEG-like azido alcohols are commonly used as linkers or spacers in the synthesis of research-grade conjugates (e.g., small-molecule probes, affinity tags) by click chemistry.
    • The hydrophilic spacer can improve aqueous handling and reduce aggregation in formulation development studies at the research scale.
  • Practical notes

    • If considering pre-formulation or device-coating studies, verify residual metals and solvent composition on the CoA/Spec Sheet.
    • Avoid making any inference of safety/efficacy; this product is not intended for human or veterinary use.
Physical Properties
  • Item-specific specifications (this product):

    • Grade/Purity: Not specified for this item; refer to CoA/Spec Sheet.
    • Concentration of solution: Not specified for this item; refer to CoA/Spec Sheet.
    • Appearance: Not specified for this item; refer to CoA/Spec Sheet.
  • Literature/computed general properties for the neat compound (for reference; not product specifications):

    • Molecular formula: C6H13N3O3 (computed from structure)
    • Molecular weight: ~175.19 g/mol (computed)
    • Physical state: typically a low-volatility liquid given the triethylene glycol backbone and hydrogen bonding (literature expectation)
    • Polarity: hydrophilic; contains one hydroxyl and two ether oxygens (literature)
    • Solubility: expected to be miscible with polar organic solvents (MeOH, EtOH, acetone, acetonitrile, DMF, DMSO) and highly soluble in water due to PEG-like segment (literature)
    • LogP: anticipated low (hydrophilic) owing to multiple heteroatoms (literature trend)
    • Boiling point, melting point, density, refractive index, pKa, UV cutoff: Not specified for this item; refer to CoA/Spec Sheet. For design purposes, treat as a high-boiling, water-miscible organic liquid.

Notes:

  • Because this is supplied as a solution of unspecified concentration, bulk properties of the neat material may not reflect the behavior of the catalog item. Verify solution solvent and concentration on the CoA before relying on numerical values for method development.
Quality and Grades
  • Item-specific information

    • Grade/Purity: Not specified for this item; refer to CoA/Spec Sheet.
    • Stabilizers/inhibitors: Not specified for this item; refer to CoA/Spec Sheet.
    • Solution solvent and concentration: Not specified for this item; refer to CoA/Spec Sheet.
  • Guidance on interpreting grades (general)

    • Research-grade reagents are suitable for most synthetic and analytical workflows. Where chromatographic or bioorthogonal applications impose stricter limits (e.g., low-metal, low-peroxide, or low-UV background), HPLC or “bioorthogonal” grades may be preferred.
    • For click chemistry (CuAAC/SPAAC), trace metal content can influence background or side reactions. If metal-sensitive applications are intended, verify metal specifications on the CoA.
    • For photochemical work, low-UV-absorbance solvent and minimal chromophoric impurities are beneficial; verify UV cutoff or absorbance specs if critical.
  • Practical tips

    • Request and retain the lot-specific CoA for exact solution concentration, solvent system, water content, residual metals, and any stabilizers.
    • If the solution is intended for bioconjugation, consider a brief polish (e.g., filtration through neutral alumina to remove adventitious copper after CuAAC) only if compatible with the solvent system; avoid drying to neat to minimize azide handling risk.
    • Perform a small-scale pilot reaction to confirm performance before committing valuable substrates.
Reaction and Applications

Key utility arises from the orthogonal pairing of a terminal azide and a primary alcohol connected by a short PEG spacer.

  • Click chemistry handles (literature)

    • CuAAC with terminal alkynes to form 1,4-disubstituted 1,2,3-triazoles; the PEG-like segment imparts hydrophilicity and spacing between conjugation partners (useful in materials and bioconjugation).
    • SPAAC with strained alkynes (DBCO, BCN) for copper-free ligations in aqueous systems.
    • Strain-promoted azide–alkyne cycloaddition tolerates buffers and biomolecule contexts; the alcohol can be used to tether to surfaces or further derivatize.
  • Alcohol derivatization (literature)

    • Mesylation/tosylation of the primary alcohol to form a leaving group, enabling nucleophilic substitution or further chain extension while retaining the azide.
    • Carbonate or carbamate formation for protective group strategies or attachment to solid supports.
    • Oxidation of the alcohol to an aldehyde (e.g., TEMPO/BAIB) or acid (e.g., TEMPO/NaOCl–NaClO2) to diversify functionality prior to click.
  • Polymer and surface modification (literature)

    • Grafting to/from reactions on oxides or polymer backbones after converting OH to silanes, phosphates, or acrylates; subsequent azide click introduces triazole-linked motifs.
  • Practical tips

    • Keep copper levels controlled in CuAAC to minimize side reactions; use CuSO4/ascorbate with TBTA or THPTA ligands for sensitive substrates.
    • Avoid strong acids or high heat that could induce azide decomposition; conduct scale-ups with calorimetric awareness and do not distill to dryness.
Reaction Conditions

General, literature-based conditions for common transformations of 2-[2-(2-azidoethoxy)ethoxy]ethanol (guidance only; optimize per substrate):

  • CuAAC (azide + terminal alkyne → 1,2,3-triazole)

    • Solvent: t-BuOH/H2O (1:1) or EtOH/H2O; alternatives MeCN/H2O, DMSO/H2O
    • Catalyst: CuSO4·5H2O (0.5–5 mol%) + sodium ascorbate (1–10 equiv vs Cu)
    • Ligand: TBTA or THPTA (0.5–1.0 equiv vs Cu) for sensitive systems
    • Temp/Time: RT to 40 °C, 1–16 h; often complete within 1–4 h
    • Atmosphere: ambient; optional N2 degassing to limit oxidative byproducts
  • SPAAC (metal-free)

    • Solvent: PBS or other neutral buffers; 0–20% DMSO as cosolvent
    • Reagents: strained alkyne (e.g., DBCO, BCN), 1.0–1.5 equiv
    • Temp/Time: RT, 0.5–24 h depending on partners and concentration
  • Staudinger reduction (to primary amine)

    • Reagents: PPh3 (1.1–1.5 equiv), H2O
    • Solvent: THF/H2O or dioxane/H2O
    • Temp/Time: RT to 50 °C, 2–12 h; follow by hydrolysis of iminophosphorane
  • Alcohol activation (tosylation/mesylation)

    • Reagents: TsCl or MsCl (1.1–1.5 equiv), Et3N or pyridine (2–3 equiv)
    • Solvent: dry DCM, THF, or MeCN
    • Temp/Time: 0 °C to RT, 1–4 h
  • Oxidation to aldehyde (TEMPO)

    • Reagents: TEMPO (2–5 mol%), NaOCl or BAIB as oxidant; NaHCO3 buffer
    • Solvent: EtOAc/H2O or MeCN/H2O
    • Temp/Time: 0–5 °C to RT, 0.5–2 h

Notes: Monitor by LC/MS or 1H NMR. Maintain moderate concentrations (≤0.2 M in azide) and avoid concentrating to dryness. For aqueous work, verify the supplied solution solvent to ensure miscibility.

Safety and Handling
  • Item-specific hazard statements:

    • Signal word: Not specified for this item; refer to SDS.
    • H-Statements: Not specified for this item; refer to SDS.
    • GHS classification/pictograms: Not specified for this item; refer to SDS.
  • General safety considerations for organic azides and azido alcohols (literature guidance; defer to SDS for authoritative data):

    • Organic azides can be energetic and may decompose exothermically at elevated temperatures or upon strong shock/friction. This azide is embedded in a short PEG-like backbone, which typically lowers volatility and handling risk, but standard azide precautions remain prudent.
    • Avoid heating to dryness; keep away from strong oxidizers, reducing agents capable of nitrene formation, and strong acids that can accelerate azide decomposition.
    • Prevent contact with transition metals and their salts during storage to avoid catalytic decomposition. Use plastic or passivated stainless tools; avoid copper surfaces unless in a controlled reaction setup.
  • PPE and hygiene

    • Wear lab coat, safety glasses, and appropriate chemically resistant gloves (e.g., nitrile). Use in a fume hood to avoid inhalation of vapors/aerosols.
    • Wash thoroughly after handling; avoid skin and eye contact.
  • First aid (overview; consult SDS)

    • Inhalation: move to fresh air; seek medical attention if symptoms persist.
    • Skin/eye contact: rinse with water for at least 15 minutes; remove contaminated clothing; seek medical advice if irritation persists.
    • Ingestion: rinse mouth; do not induce vomiting; seek medical attention.
  • Storage and stability

    • Store at 2–8 °C as specified; keep container tightly closed, protected from light, heat, and ignition sources.
    • Do not freeze unless the CoA indicates compatibility of the solution matrix with freezing.

Always consult the product-specific SDS for definitive hazard, exposure limits, and spill/cleanup procedures.

Solvent Selection

This product is a reagent supplied as a solution and is not typically used as a bulk solvent. Selection considerations therefore focus on solvents for reactions employing this azido alcohol.

  • General miscibility and polarity (literature)

    • Highly polar and hydrophilic; expected to be miscible with water and polar organics (MeOH, EtOH, iPrOH, acetone, MeCN, DMF, DMSO) due to the PEG-like backbone.
    • Low volatility; compatible with higher-boiling polar aprotics for coupling steps and with water/alcohol mixtures for click chemistry.
  • Choosing media by application (literature guidance)

    • CuAAC (click to terminal alkynes): t-BuOH/H2O, EtOH/H2O, or MeCN/H2O with CuSO4/sodium ascorbate; strictly oxygen-controlled conditions often unnecessary but degassing can improve consistency.
    • SPAAC (copper-free with DBCO/BCN): purely aqueous buffers (PBS) or mixed aqueous-organic media (e.g., PBS/DMSO) enable bioconjugations.
    • Alcohol derivatization (tosylation/mesylation, carbonate formation): use dry dichloromethane, THF, MeCN, or DMF with mild base (e.g., Et3N, pyridine) under anhydrous conditions.
  • Comparison notes (literature)

    • Versus longer PEG-azides: lower viscosity and higher reactivity in organic media; slightly reduced aqueous solubility.
    • Versus 2-azidoethanol: improved water compatibility and lower volatility; slightly bulkier linker which can influence steric environment in coupling.

Confirm the supplied solution solvent before planning extractions or solvent switches to avoid precipitation or concentration of the azide.

Storage and Reconstitution
  • Item-specific storage/shipping

    • Storage: Store at 2–8 °C (as provided in Product Data).
    • Shipped: On wet ice.
  • Handling the solution

    • Keep tightly closed, in the original container, protected from light and heat. Record the receipt date and minimize headspace opening to limit solvent loss or contamination.
    • Concentration and solvent: Not specified for this item; refer to CoA/Spec Sheet.
  • Reconstitution/use

    • Supplied as a ready-to-use solution; no reconstitution typically required. Mix gently before use to ensure homogeneity.
    • If crystallization or phase separation is observed upon cold storage, allow to warm to room temperature and vortex to redissolve. If insoluble material persists, verify solvent identity and concentration on the CoA.
    • For precise stoichiometry in reactions, determine the exact concentration (by CoA or titration/quantitative NMR) before use.
  • Stability guidance

    • Avoid prolonged exposure to elevated temperature. Do not concentrate to dryness; avoid rotary evaporation to complete dryness due to azide safety considerations.
    • Store away from acids, strong oxidants, and reactive metals. Use clean, dry tools; reseal promptly after dispensing.
  • Research use note: For research use only.

Structure and Identity

Brief overview: 2-[2-(2-Azidoethoxy)ethoxy]ethanol solution is a short PEG-like azido alcohol bearing a terminal azide (–N3) and a terminal primary alcohol (–CH2OH) connected by a triethylene glycol spacer. This bifunctional motif is widely used as a hydrophilic linker and azide handle for click chemistry.

  • Item-specific (from Product Data)

    • Product name: 2-[2-(2-Azidoethoxy)ethoxy]ethanol solution
    • CAS: 86520-52-7
    • CID: 11008438
    • InChIKey: 281410 (as provided)
    • Storage: 2–8 °C; shipped on wet ice
    • Grade/Purity: Not specified for this item; refer to CoA/Spec Sheet.
    • Appearance: Not specified for this item; refer to CoA/Spec Sheet.
  • Literature/computed identifiers and features (for reference; not item specifications)

    • Common structural formula (literature): HO–CH2–CH2–O–CH2–CH2–O–CH2–CH2–N3
    • Functional groups: primary alcohol, dialkyl ether chain (triethylene glycol segment), terminal organic azide
    • Approximate molecular formula (computed from structure): C6H13N3O3
    • Approximate molecular weight (computed): ~175.19 g/mol
    • Typical SMILES (literature): N=[N+]=NCCOCCOCCO
  • 2D structural description (literature): A linear chain of three –CH2–CH2– units interrupted by two oxygens (–O–CH2–CH2–O–), terminating in a primary alcohol at one end and a linear azide (–N=N+=N−) attached to a terminal methylene at the other. No rings, no stereocenters, and no geometric isomerism.

Synthetic Utility

This reagent offers two orthogonal functional handles:

  • Azide (–N3) reactivity (literature)

    • Click cycloadditions: CuAAC with terminal alkynes; SPAAC with strained cyclooctynes to give triazoles with excellent chemoselectivity.
    • Staudinger reduction/ligation: PPh3-mediated conversion to a primary amine (after hydrolysis) or ligation to phosphine esters to form amide-like linkages under mild conditions.
  • Alcohol (–CH2OH) reactivity (literature)

    • Activation as sulfonates (Ms/Ts) or carbonates to enable SN2 substitution, polymer grafting, or surface immobilization.
    • Oxidation to aldehyde/acid for further coupling (Schiff base formation, reductive amination, amide coupling after oxidation).
    • Esterification/urethane formation to install protecting groups or functional anchors.
  • Spacer attributes

    • The triethylene glycol-like segment imparts flexibility, increases water compatibility, and helps separate functional groups from surfaces or biomolecular recognition sites, often improving accessibility in conjugation chemistry.
  • Orthogonality strategy

    • Sequence alcohol chemistry first (under azide-stable conditions), then perform click; alternatively, click first and derivatize the alcohol if the triazole is compatible with the conditions.

Plan conditions to preserve azide integrity: avoid strong acids, nitrosating conditions, and high-temperature operations; do not distill to dryness.

Target Specificity

Not applicable. This product is a small-molecule reagent (azido alcohol) and is not an antibody, enzyme, or affinity reagent. No antigen or biological target specificity is associated with the catalog item.

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