By Target / Pathway / Disease

Explore small molecules, screening libraries, and tool compounds for discovery research. Browse by target, pathway, or ligand family to quickly find inhibitors, agonists, and chemical probes, with searchable structure/CAS data and supporting documents (SDS/COA where available).

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Ready-to-screen compound libraries and focused sets for hit discovery. Browse libraries by target class, pathway, scaffold, or application, and review size, format, and compound information to build screening panels.Customize Your Screening Library to choose compounds, format, and volume, and we’ll prepare a ready-to-use set for you.Customize Your Screening Library

Navigate small molecules by ligand family or scaffold to build focused sets and explore structure–activity relationships. This category groups related chemotypes, helping you select analogs, fragments, and tool molecules for discovery research.

ADC-focused building blocks and tools to support antibody–drug conjugate research. Explore payloads, linkers, conjugation reagents, and related small-molecule components (where available) for designing and evaluating ADC constructs.

PROTAC

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PROTAC and targeted protein degradation tools for discovery research. Browse degrader-related ligands, linkers, and building blocks (where available) to assemble or screen PROTAC designs, with clear identifiers for efficient selection.

Explore pathway-focused tool compounds to study and modulate key signaling cascades. Browse small molecules grouped by signaling pathway to support mechanism studies, phenotypic assays, and target validation, with clear identifiers for fast searching.

Find bioactive small molecules organized by protein target (DTO). Quickly locate tool compounds for specific targets and compare identifiers such as structure, CAS, and synonyms—plus supporting documents —to build screening and validation sets.

Shop small molecules and tool compounds organized by disease area (DOID). Discover chemical probes, libraries, and related products mapped to therapeutic areas to help assemble compound sets for screening, pathway exploration, and model studies.

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  1. MK-8245
    CAS: 1030612-90-8 Formula: C17H16BrFN6O4 Molecular Weight: 467.26
    ● In Stock — US warehouse, ships to EU* Item #: M127205
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    Technical Identifiers
    IUPAC Name
    2-[5-[3-[4-(2-bromo-5-fluorophenoxy)piperidin-1-yl]-1,2-oxazol-5-yl]tetrazol-2-yl]acetic acid
    SMILES
    C1CN(CCC1OC2=C(C=CC(=C2)F)Br)C3=NOC(=C3)C4=NN(N=N4)CC(=O)O
    InChIKey
    UJEAABFSXKCSGI-UHFFFAOYSA-N
    InChI
    1S/C17H16BrFN6O4/c18-12-2-1-10(19)7-13(12)28-11-3-5-24(6-4-11)15-8-14(29-22-15)17-20-23-25(21-17)9-16(26)27/h1-2,7-8,11H,3-6,9H2,(H,26,27)
    Synonyms
    HY-13070 | SPBio_002093 | SPBio_002446 | MLS006011144 | CCG-269424 | MK8245 | MK-8245 | 2H-Tetrazole-2-acetic acid, 5...
  2. ML 339
    CAS: 2080300-49-6 Formula: C26H32ClN3O5 Molecular Weight: 502.00
    ≥98% mixture of isomers
    ● In Stock — US warehouse, ships to EU* Item #: M288061
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    IUPAC Name
    N-[(1S,5R)-9-[2-(2-chloroanilino)-2-oxoethyl]-9-azabicyclo[3.3.1]nonan-3-yl]-3,4,5-trimethoxybenzamide
    SMILES
    COC1=CC(=CC(=C1OC)OC)C(=O)NC2CC3CCCC(C2)N3CC(=O)NC4=CC=CC=C4Cl
    InChIKey
    SSPYAPRDKNCABY-YQQQUEKLSA-N
    InChI
    1S/C26H32ClN3O5/c1-33-22-11-16(12-23(34-2)25(22)35-3)26(32)28-17-13-18-7-6-8-19(14-17)30(18)15-24(31)29-21-10-5-4-9-20(21)27/h4-5,9-12,17-19H,6-8,13-1show more
    Synonyms
    N-[(1R,3S,5S)-9-(2-((2-Chlorophenyl)amino)-2-exoethyl)-9-azabicyclo[3.3.1]nonan-3-yl)-3,4,5-trimethoxybenzamide
  3. NNC 63-0532
    CAS: 250685-44-0 Formula: C27H29N3O3 Molecular Weight: 443.54
    ● In Stock — US warehouse, ships to EU* Item #: N288122
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    IUPAC Name
    methyl 2-[8-(naphthalen-1-ylmethyl)-4-oxo-1-phenyl-1,3,8-triazaspiro[4.5]decan-3-yl]acetate
    SMILES
    COC(=O)CN1CN(C2(C1=O)CCN(CC2)CC3=CC=CC4=CC=CC=C43)C5=CC=CC=C5
    InChIKey
    AQMPIDSGLFVVPL-UHFFFAOYSA-N
    InChI
    1S/C27H29N3O3/c1-33-25(31)19-29-20-30(23-11-3-2-4-12-23)27(26(29)32)14-16-28(17-15-27)18-22-10-7-9-21-8-5-6-13-24(21)22/h2-13H,14-20H2,1H3
    Synonyms
    (8-Naphthalen-1-ylmethyl-4-oxo-1-phenyl-1,3,8-triaza-spiro[4.5]dec-3-yl)-acetic acid methyl ester | AQMPIDSGLFVVPL-UH...
  4. PCNA I1
    CAS: 444930-42-1 PubChem CID: 135533619 Formula: C17H14N2O2S Molecular Weight: 310.37
    ● In Stock — US warehouse, ships to EU* Item #: P286928
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    IUPAC Name
    N-[(E)-(1-hydroxynaphthalen-2-yl)methylideneamino]-3-methylthiophene-2-carboxamide
    SMILES
    CC1=C(SC=C1)C(=O)NN=CC2=C(C3=CC=CC=C3C=C2)O
    InChIKey
    NZWTWRNHYZNWNW-VCHYOVAHSA-N
    InChI
    1S/C17H14N2O2S/c1-11-8-9-22-16(11)17(21)19-18-10-13-7-6-12-4-2-3-5-14(12)15(13)20/h2-10,20H,1H3,(H,19,21)/b18-10+
    Synonyms
    N-(3-Methylthiophene-2-carboxylic acid)-N'-[(1-hydroxy-2-naphthalenyl)methylene]hydrazide | PCNA-I1 | (E)-N'-((1-hydr...
  5. N1-Acetylspermine trihydrochloride
    CAS: 77928-70-2 EC Number: 634-755-8 PubChem CID: 16211018 Formula: C12H28N4O · 3HCl Molecular Weight: 353.76
    Solid Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. ≥97%
    ● In Stock — US warehouse, ships to EU* Item #: N301514
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    IUPAC Name
    N-[3-[4-(3-aminopropylamino)butylamino]propyl]acetamide;trihydrochloride
    SMILES
    CC(=O)NCCCNCCCCNCCCN.Cl.Cl.Cl
    InChIKey
    QQSPUTBJDXPUCR-UHFFFAOYSA-N
    InChI
    1S/C12H28N4O.3ClH/c1-12(17)16-11-5-10-15-8-3-2-7-14-9-4-6-13;;;/h14-15H,2-11,13H2,1H3,(H,16,17);3*1H
    Synonyms
    N-[3-({4-[(3-aminopropyl)amino]butyl}amino)propyl]acetamide trihydrochloride | N1-Acetylspermine (hydrochloride)
  6. Pilocarpine HCl, Muscarinic acetylcholine receptor M3 agonist
    CAS: 54-71-7 EC Number: 200-212-5 Formula: C11H16N2O2·HCl Molecular Weight: 244.72
    Solid ≥99%
    ● In Stock — US warehouse, ships to EU* Item #: P129614
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    IUPAC Name
    (3S,4R)-3-ethyl-4-[(3-methylimidazol-4-yl)methyl]oxolan-2-one;hydrochloride
    SMILES
    CCC1C(COC1=O)CC2=CN=CN2C.Cl
    InChIKey
    RNAICSBVACLLGM-GNAZCLTHSA-N
    InChI
    1S/C11H16N2O2.ClH/c1-3-10-8(6-15-11(10)14)4-9-5-12-7-13(9)2;/h5,7-8,10H,3-4,6H2,1-2H3;1H/t8-,10-;/m0./s1
    Synonyms
    Mistura P | SCHEMBL41427 | MLS001076314 | AC-33119 | NCGC00094254-01 | PILOCARPINE HYDROCHLORIDE [WHO-IP] | Isoptocar...
  7. YS-035 hydrochloride
    CAS: 89805-39-0 PubChem CID: 6917841 Formula: C21H29NO4.HCl Molecular Weight: 395.93
    ● In Stock — US warehouse, ships to EU* Item #: Y287443
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    IUPAC Name
    2-(3,4-dimethoxyphenyl)-N-[2-(3,4-dimethoxyphenyl)ethyl]-N-methylethanamine;hydrochloride
    SMILES
    CN(CCC1=CC(=C(C=C1)OC)OC)CCC2=CC(=C(C=C2)OC)OC.Cl
    InChIKey
    GYBONEHHSUABAO-UHFFFAOYSA-N
    InChI
    1S/C21H29NO4.ClH/c1-22(12-10-16-6-8-18(23-2)20(14-16)25-4)13-11-17-7-9-19(24-3)21(15-17)26-5;/h6-9,14-15H,10-13H2,1-5H3;1H
    Synonyms
    J-019405 | N,N-Bis(2-(3,4-dimethoxyphenyl)ethyl)methylamine hydrochloride | Y-101 | HY-100928 | 2-(3,4-Dimethoxypheny...
  8. NVP-LCQ195
    CAS: 902156-99-4 Formula: C17H19Cl2N5O4S Molecular Weight: 460.33
    Solid ≥98%
    ● In Stock — US warehouse, ships to EU* Item #: N127100
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    IUPAC Name
    4-[(2,6-dichlorobenzoyl)amino]-N-(1-methylsulfonylpiperidin-4-yl)-1H-pyrazole-5-carboxamide
    SMILES
    CS(=O)(=O)N1CCC(CC1)NC(=O)C2=C(C=NN2)NC(=O)C3=C(C=CC=C3Cl)Cl
    InChIKey
    CCUXEBOOTMDSAM-UHFFFAOYSA-N
    InChI
    1S/C17H19Cl2N5O4S/c1-29(27,28)24-7-5-10(6-8-24)21-17(26)15-13(9-20-23-15)22-16(25)14-11(18)3-2-4-12(14)19/h2-4,9-10H,5-8H2,1H3,(H,20,23)(H,21,26)(H,22show more
    Synonyms
    4-(2,6-dichlorobenzamido)-N-(1-(methylsulfonyl)piperidin-4-yl)-1H-pyrazole-3-carboxamide | AT9311 | AT-9311 | CLB1569...
  9. RGFP966, Inhibitor of histone deacetylase 3
    CAS: 1396841-57-8 PubChem CID: 56650312 Formula: C21H19FN4O Molecular Weight: 362.4
    ● In Stock — US warehouse, ships to EU* Item #: R129686
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    IUPAC Name
    (E)-N-(2-amino-4-fluorophenyl)-3-[1-[(E)-3-phenylprop-2-enyl]pyrazol-4-yl]prop-2-enamide
    SMILES
    C1=CC=C(C=C1)C=CCN2C=C(C=N2)C=CC(=O)NC3=C(C=C(C=C3)F)N
    InChIKey
    BLVQHYHDYFTPDV-VCABWLAWSA-N
    InChI
    1S/C21H19FN4O/c22-18-9-10-20(19(23)13-18)25-21(27)11-8-17-14-24-26(15-17)12-4-7-16-5-2-1-3-6-16/h1-11,13-15H,12,23H2,(H,25,27)/b7-4+,11-8+
    Synonyms
    Bis(3-Carboxy-4-hydroxyphenyl)methane | SCHEMBL12497871 | SCHEMBL12497867 | A922278 | RGFP966 | RGFP-966 | (E,E)-N-(2...
  10. Nitrocaramiphen hydrochloride
    CAS: 98636-73-8 Formula: C18H26N2O4•(HCl) Molecular Weight: 370.88
    ● In Stock — US warehouse, ships to EU* Item #: N287162
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    IUPAC Name
    2-(diethylamino)ethyl 1-(4-nitrophenyl)cyclopentane-1-carboxylate;hydrochloride
    SMILES
    CCN(CC)CCOC(=O)C1(CCCC1)C2=CC=C(C=C2)[N+](=O)[O-].Cl
    InChIKey
    XWQWACGTGFICFO-UHFFFAOYSA-N
    InChI
    1S/C18H26N2O4.ClH/c1-3-19(4-2)13-14-24-17(21)18(11-5-6-12-18)15-7-9-16(10-8-15)20(22)23;/h7-10H,3-6,11-14H2,1-2H3;1H
    Synonyms
    2-Diethylaminoethyl 1-(4-nitrophenyl)cyclopentanecarboxylate hydrochloride
  11. Ro 48-8071
    CAS: 189197-69-1 Formula: C27H31BrFNO6 Molecular Weight: 564.4
    ● In Stock — US warehouse, ships to EU* Item #: R276229
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    IUPAC Name
    (4-bromophenyl)-[2-fluoro-4-[6-[methyl(prop-2-enyl)amino]hexoxy]phenyl]methanone;(E)-but-2-enedioic acid
    SMILES
    CN(CCCCCCOC1=CC(=C(C=C1)C(=O)C2=CC=C(C=C2)Br)F)CC=C.C(=CC(=O)O)C(=O)O
    InChIKey
    XCYAYLWZCRGKDS-WLHGVMLRSA-N
    InChI
    1S/C23H27BrFNO2.C4H4O4/c1-3-14-26(2)15-6-4-5-7-16-28-20-12-13-21(22(25)17-20)23(27)18-8-10-19(24)11-9-18;5-3(6)1-2-4(7)8/h3,8-13,17H,1,4-7,14-16H2,2H3show more
    Synonyms
    SCHEMBL4437311 | SR-05000001957 | Methanone, (4-bromophenyl)[2-fluoro-4-[[6-(methyl-2-propen-1-ylamino)hexyl]oxy]phen...
  12. Ro 67-7476
    CAS: 298690-60-5 PubChem CID: 32681978 Formula: C17H18FNO2S Molecular Weight: 319.39
    ◐ .Made to order · 8–12 wks Item #: R288229
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    IUPAC Name
    (2S)-2-(4-fluorophenyl)-1-(4-methylphenyl)sulfonylpyrrolidine
    SMILES
    CC1=CC=C(C=C1)S(=O)(=O)N2CCCC2C3=CC=C(C=C3)F
    InChIKey
    DAEHFYNGSSBGSS-KRWDZBQOSA-N
    InChI
    1S/C17H18FNO2S/c1-13-4-10-16(11-5-13)22(20,21)19-12-2-3-17(19)14-6-8-15(18)9-7-14/h4-11,17H,2-3,12H2,1H3/t17-/m0/s1
    Synonyms
    Ro 67-7476 | NCGC00370915-01 | (2S)-2-(4-Fluorophenyl)-1-[(4-methylphenyl)sulfonyl]-pyrrolidine | (S)-2-(4-fluoro-phe...
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Frequently Asked Questions

What does the By Target/Pathway/Disease listing cover?
It groups compounds associated with targets in By Target/Pathway/Disease, organised so you can move from the pathway to an individual target and then to a specific chemotype. Each entry carries structure, CAS number, and reported activity.
How is By Target/Pathway/Disease organised?
By Target/Pathway/Disease is broken down into Compound Libraries, PROTACs, molecular glues and other degraders and Antibody-drug Conjugates(ADC). Compounds acting on more than one node appear under each relevant target.
How do I choose compounds for By Target/Pathway/Disease research?
For By Target/Pathway/Disease, pick a well-characterised reference compound for the node you want to perturb, and pair it with a structurally unrelated compound hitting the same target — that is the cleanest way to separate pathway effects from off-target ones. Check potency, selectivity, and cell permeability against your assay format. All products are supplied for professional research and development use only, and are not for use in humans, animals, diagnostics, or therapy.
How do I find a specific compound within By Target/Pathway/Disease?
Search By Target/Pathway/Disease by compound name, CAS number, or SMILES, or drill down through the target listing. Unlisted compounds and bulk quantities: [email protected]. We supply verified businesses, research institutions, universities, and government agencies.

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