By Target / Pathway / Disease

Explore small molecules, screening libraries, and tool compounds for discovery research. Browse by target, pathway, or ligand family to quickly find inhibitors, agonists, and chemical probes, with searchable structure/CAS data and supporting documents (SDS/COA where available).

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Ready-to-screen compound libraries and focused sets for hit discovery. Browse libraries by target class, pathway, scaffold, or application, and review size, format, and compound information to build screening panels.Customize Your Screening Library to choose compounds, format, and volume, and we’ll prepare a ready-to-use set for you.Customize Your Screening Library

Navigate small molecules by ligand family or scaffold to build focused sets and explore structure–activity relationships. This category groups related chemotypes, helping you select analogs, fragments, and tool molecules for discovery research.

ADC-focused building blocks and tools to support antibody–drug conjugate research. Explore payloads, linkers, conjugation reagents, and related small-molecule components (where available) for designing and evaluating ADC constructs.

PROTAC

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PROTAC and targeted protein degradation tools for discovery research. Browse degrader-related ligands, linkers, and building blocks (where available) to assemble or screen PROTAC designs, with clear identifiers for efficient selection.

Explore pathway-focused tool compounds to study and modulate key signaling cascades. Browse small molecules grouped by signaling pathway to support mechanism studies, phenotypic assays, and target validation, with clear identifiers for fast searching.

Find bioactive small molecules organized by protein target (DTO). Quickly locate tool compounds for specific targets and compare identifiers such as structure, CAS, and synonyms—plus supporting documents —to build screening and validation sets.

Shop small molecules and tool compounds organized by disease area (DOID). Discover chemical probes, libraries, and related products mapped to therapeutic areas to help assemble compound sets for screening, pathway exploration, and model studies.

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  1. (-)-Blebbistatin
    CAS: 856925-71-8 PubChem CID: 5287792 Formula: C18H16N2O2 Molecular Weight: 292.33
    ● In Stock — US warehouse, ships to EU* Item #: B129580
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    IUPAC Name
    (3aS)-3a-hydroxy-6-methyl-1-phenyl-2,3-dihydropyrrolo[2,3-b]quinolin-4-one
    SMILES
    Cc1ccc2N=C3N(CC[C@@]3(O)C(=O)c2c1)c4ccccc4
    InChIKey
    LZAXPYOBKSJSEX-GOSISDBHSA-N
    InChI
    1S/C18H16N2O2/c1-12-7-8-15-14(11-12)16(21)18(22)9-10-20(17(18)19-15)13-5-3-2-4-6-13/h2-8,11,22H,9-10H2,1H3/t18-/m1/s1
    Synonyms
    8WII7624I5 | (-)Blebbistatin | (S)-blebbistatin | (S)-3a-hydroxy-6-methyl-1-phenyl-3,3a-dihydro-1H-pyrrolo[2,3-b]quin...
  2. (-)-Huperzine A
    CAS: 102518-79-6 EC Number: 600-320-6 Formula: C15H18N2O Molecular Weight: 242.32
    Solid Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. ≥98%
    ● In Stock — US warehouse, ships to EU* Item #: H107336
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    IUPAC Name
    (1R,9R)-1-amino-13-ethylidene-11-methyl-6-azatricyclo[7.3.1.02,7]trideca-2(7),3,10-trien-5-one
    SMILES
    CC=C1C2CC3=C(C1(CC(=C2)C)N)C=CC(=O)N3
    InChIKey
    ZRJBHWIHUMBLCN-ZUZCIYMTSA-N
    InChI
    1S/C15H18N2O/c1-3-11-10-6-9(2)8-15(11,16)12-4-5-14(18)17-13(12)7-10/h3-6,10H,7-8,16H2,1-2H3,(H,17,18)/t10-,15+/m0/s1
    Synonyms
    (2S)-2-Amino-3-((((R)-2,3-bis(stearoyloxy)propoxy)-(hydroxy)phosphoryl)oxy)propanoicacid | Fordine | SCHEMBL16789797 ...
  3. (-)-JQ-1
    CAS: 1268524-71-5 Formula: C23H25ClN4O2S Molecular Weight: 456.99
    ● In Stock — US warehouse, ships to EU* Item #: J124877
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    IUPAC Name
    tert-butyl 2-[(9R)-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.02,6]trideca-2(6),4,7,10,12-pentaen-9-yl]acetate
    SMILES
    CC1=C(SC2=C1C(=NC(C3=NN=C(N32)C)CC(=O)OC(C)(C)C)C4=CC=C(C=C4)Cl)C
    InChIKey
    DNVXATUJJDPFDM-QGZVFWFLSA-N
    InChI
    1S/C23H25ClN4O2S/c1-12-13(2)31-22-19(12)20(15-7-9-16(24)10-8-15)25-17(11-18(29)30-23(4,5)6)21-27-26-14(3)28(21)22/h7-10,17H,11H2,1-6H3/t17-/m1/s1
    Synonyms
    (R)-tert-Butyl 2-(4-(4-chlorophenyl)-2,3,9-trimethyl-6H-thieno-[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl)acetat...
  4. (-)-Scopolamine hydrobromide trihydrate
    CAS: 6533-68-2 EC Number: 613-776-6 PubChem CID: 20055509 Formula: C17H21NO4·HBr·3H2O Molecular Weight: 438.31
    Solid ≥98%
    ● In Stock — US warehouse, ships to EU* Item #: S107418
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    IUPAC Name
    [(1S,2S,4R,5R)-9-methyl-3-oxa-9-azatricyclo[3.3.1.02,4]nonan-7-yl] (2S)-3-hydroxy-2-phenylpropanoate;trihydrate;hydrobromide
    SMILES
    CN1C2CC(CC1C3C2O3)OC(=O)C(CO)C4=CC=CC=C4.O.O.O.Br
    InChIKey
    LACQPOBCQQPVIT-CQPQIMGBSA-N
    InChI
    1S/C17H21NO4.BrH.3H2O/c1-18-13-7-11(8-14(18)16-15(13)22-16)21-17(20)12(9-19)10-5-3-2-4-6-10;;;;/h2-6,11-16,19H,7-9H2,1H3;1H;3*1H2/t11?,12-,13-,14+,15-show more
    Synonyms
    NSC794199 | SCOPOLAMINE HYDROBROMIDE [USP MONOGRAPH] | Scopolamine hydrobromide, meets USP testing specifications | s...
  5. 2-Fluoro-6-hydroxyphenylboronic acid(contains varying amounts of Anhydride)
    CAS: 1256345-60-4 Formula: C6H6BFO3 Molecular Weight: 155.92
    ● In Stock — US warehouse, ships to EU* Item #: F302302
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    IUPAC Name
    (2-fluoro-6-hydroxyphenyl)boronic acid
    SMILES
    B(C1=C(C=CC=C1F)O)(O)O
    InChIKey
    FPXQHZPCFRQWCP-UHFFFAOYSA-N
    InChI
    1S/C6H6BFO3/c8-4-2-1-3-5(9)6(4)7(10)11/h1-3,9-11H
    Synonyms
    1256345-60-4 | 2-FLUORO-6-HYDROXYPHENYLBORONIC ACID | (2-Fluoro-6-hydroxyphenyl)boronic acid | ZB0260 | Boronic acid,...
  6. 4-Chloro-2-(trifluoroacetyl)aniline hydrochloride monohydrate
    CAS: 173676-59-0 EC Number: 605-687-6 Formula: C8H5ClF3NO.HCl.H2O Molecular Weight: 278.1
    Solid ≥95%
    ● In Stock — US warehouse, ships to EU* Item #: C182091
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    IUPAC Name
    1-(2-amino-5-chlorophenyl)-2,2,2-trifluoroethanone;hydrate;hydrochloride
    SMILES
    C1=CC(=C(C=C1Cl)C(=O)C(F)(F)F)N.O.Cl
    InChIKey
    FUYMYLYDBVWEHG-UHFFFAOYSA-N
    InChI
    1S/C8H5ClF3NO.ClH.H2O/c9-4-1-2-6(13)5(3-4)7(14)8(10,11)12;;/h1-3H,13H2;1H;1H2
    Synonyms
    DTXSID40657739 | 2-(Trifluoroacetyl)-4-chloroaniline, Hydrochloride Hydrate | 4-Chloro-2-(trifluoroacetyl)aniline hyd...
  7. (1H,1H,2H,2H-Perfluorooctyl)methyldichlorosilane
    CAS: 73609-36-6 Formula: C9H7Cl2F13Si Molecular Weight: 461.13
    Liquid ≥97%
    ● In Stock — US warehouse, ships to EU* Item #: H304518
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    IUPAC Name
    dichloro-methyl-(3,3,4,4,5,5,6,6,7,7,8,8,8-tridecafluorooctyl)silane
    SMILES
    C[Si](CCC(C(C(C(C(C(F)(F)F)(F)F)(F)F)(F)F)(F)F)(F)F)(Cl)Cl
    InChIKey
    VBDMVWQNRXVEGC-UHFFFAOYSA-N
    InChI
    1S/C9H7Cl2F13Si/c1-25(10,11)3-2-4(12,13)5(14,15)6(16,17)7(18,19)8(20,21)9(22,23)24/h2-3H2,1H3
    Synonyms
    (1h,1h,2h,2h-perfluorooctyl)methyldichlorosilane | (Tridecafluoro-1,1,2,2-Tetrahydroctyl)Methyldichlorosilane | SCHEM...
  8. 2-Hydroxy Estrone
    CAS: 362-06-1 Formula: C18H22O3 Molecular Weight: 286.37
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. ≥95%
    ● In Stock — US warehouse, ships to EU* Item #: H336198
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    IUPAC Name
    (8R,9S,13S,14S)-2,3-dihydroxy-13-methyl-7,8,9,11,12,14,15,16-octahydro-6H-cyclopenta[a]phenanthren-17-one
    SMILES
    CC12CCC3C(C1CCC2=O)CCC4=CC(=C(C=C34)O)O
    InChIKey
    SWINWPBPEKHUOD-JPVZDGGYSA-N
    InChI
    1S/C18H22O3/c1-18-7-6-11-12(14(18)4-5-17(18)21)3-2-10-8-15(19)16(20)9-13(10)11/h8-9,11-12,14,19-20H,2-7H2,1H3/t11-,12+,14-,18-/m0/s1
    Synonyms
    Catecholestrone
  9. (20S)-Protopanaxatriol
    CAS: 34080-08-5 Formula: C30H52O4 Molecular Weight: 476.73
    Solid ≥98%
    ● In Stock — US warehouse, ships to EU* Item #: S303478
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    IUPAC Name
    (3S,5R,6S,8R,9R,10R,12R,13R,14R,17S)-17-[(2S)-2-hydroxy-6-methylhept-5-en-2-yl]-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cshow more
    SMILES
    CC(=CCCC(C)(C1CCC2(C1C(CC3C2(CC(C4C3(CCC(C4(C)C)O)C)O)C)O)C)O)C
    InChIKey
    SHCBCKBYTHZQGZ-CJPZEJHVSA-N
    InChI
    1S/C30H52O4/c1-18(2)10-9-13-30(8,34)19-11-15-28(6)24(19)20(31)16-22-27(5)14-12-23(33)26(3,4)25(27)21(32)17-29(22,28)7/h10,19-25,31-34H,9,11-17H2,1-8H3show more
    Synonyms
    CHEBI:75951 | protopanaxatriol-type ginsenoside aglycone | Protopanaxatriol | 3-Deoxy-3-oxo-20(S)-protopanaxatriol; 3...
  10. (2S)-2-Hydroxyglutaric Acid Disodium Salt
    CAS: 63512-50-5 Formula: C5H6Na2O5 Molecular Weight: 192.078
    ● In Stock — US warehouse, ships to EU* Item #: S135663
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    IUPAC Name
    disodium;(2S)-2-hydroxypentanedioate
    SMILES
    C(CC(=O)[O-])C(C(=O)[O-])O.[Na+].[Na+]
    InChIKey
    DZHFTEDSQFPDPP-QTNFYWBSSA-L
    InChI
    1S/C5H8O5.2Na/c6-3(5(9)10)1-2-4(7)8;;/h3,6H,1-2H2,(H,7,8)(H,9,10);;/q;2*+1/p-2/t3-;;/m0../s1
    Synonyms
    (S)-2-Hydroxypentanedioic acid disodium salt Disodium | (S)-2-hydroxyglutarate | L-α-Hydroxyglutaric acid disodium salt
  11. 2-Imino-4-methylpiperidine acetate
    CAS: 165383-72-2 PubChem CID: 53229995 Formula: C8H16N2O2 Molecular Weight: 178.22
    ● In Stock — US warehouse, ships to EU* Item #: I340472
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    IUPAC Name
    acetic acid;4-methyl-2,3,4,5-tetrahydropyridin-6-amine
    SMILES
    CC1CCN=C(C1)N.CC(=O)O
    InChIKey
    QNJYWSIQJFUBOR-UHFFFAOYSA-N
    InChI
    1S/C6H12N2.C2H4O2/c1-5-2-3-8-6(7)4-5;1-2(3)4/h5H,2-4H2,1H3,(H2,7,8);1H3,(H,3,4)
    Synonyms
    4-methyl-2,3,4,5-tetrahydropyridin-6-amine | NOS-IN-1
  12. (2R,3S)-2-((R)-1-(3,5-Bis(trifluoromethyl)phenyl)-ethoxy)-3-(4-fluorophenyl)morpholine hydrochloride
    CAS: 171482-05-6 EC Number: 691-262-0 PubChem CID: 10116311 Formula: C20H19ClF7NO2 Molecular Weight: 473.82
    ◐ .Made to order · 8–12 wks Item #: R305160
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    IUPAC Name
    (2R,3S)-2-[(1R)-1-[3,5-bis(trifluoromethyl)phenyl]ethoxy]-3-(4-fluorophenyl)morpholine;hydrochloride
    SMILES
    CC(C1=CC(=CC(=C1)C(F)(F)F)C(F)(F)F)OC2C(NCCO2)C3=CC=C(C=C3)F.Cl
    InChIKey
    DWCCMKXSGCKMJF-YNXGUESPSA-N
    InChI
    1S/C20H18F7NO2.ClH/c1-11(13-8-14(19(22,23)24)10-15(9-13)20(25,26)27)30-18-17(28-6-7-29-18)12-2-4-16(21)5-3-12;/h2-5,8-11,17-18,28H,6-7H2,1H3;1H/t11-,1show more
    Synonyms
    s10990 | AKOS015995122 | C20H19ClF7NO2 | AM84603 | SCHEMBL14890138 | J-500977 | (2R,3S)-2-[(1R)-1-[3,5-BIS(TRIFLUOROM...
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Frequently Asked Questions

What does the By Target/Pathway/Disease listing cover?
It groups compounds associated with targets in By Target/Pathway/Disease, organised so you can move from the pathway to an individual target and then to a specific chemotype. Each entry carries structure, CAS number, and reported activity.
How is By Target/Pathway/Disease organised?
By Target/Pathway/Disease is broken down into Compound Libraries, PROTACs, molecular glues and other degraders and Antibody-drug Conjugates(ADC). Compounds acting on more than one node appear under each relevant target.
How do I choose compounds for By Target/Pathway/Disease research?
For By Target/Pathway/Disease, pick a well-characterised reference compound for the node you want to perturb, and pair it with a structurally unrelated compound hitting the same target — that is the cleanest way to separate pathway effects from off-target ones. Check potency, selectivity, and cell permeability against your assay format. All products are supplied for professional research and development use only, and are not for use in humans, animals, diagnostics, or therapy.
How do I find a specific compound within By Target/Pathway/Disease?
Search By Target/Pathway/Disease by compound name, CAS number, or SMILES, or drill down through the target listing. Unlisted compounds and bulk quantities: [email protected]. We supply verified businesses, research institutions, universities, and government agencies.

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