By Target / Pathway / Disease

Explore small molecules, screening libraries, and tool compounds for discovery research. Browse by target, pathway, or ligand family to quickly find inhibitors, agonists, and chemical probes, with searchable structure/CAS data and supporting documents (SDS/COA where available).

136,942 products

Ready-to-screen compound libraries and focused sets for hit discovery. Browse libraries by target class, pathway, scaffold, or application, and review size, format, and compound information to build screening panels.Customize Your Screening Library to choose compounds, format, and volume, and we’ll prepare a ready-to-use set for you.Customize Your Screening Library

Navigate small molecules by ligand family or scaffold to build focused sets and explore structure–activity relationships. This category groups related chemotypes, helping you select analogs, fragments, and tool molecules for discovery research.

ADC-focused building blocks and tools to support antibody–drug conjugate research. Explore payloads, linkers, conjugation reagents, and related small-molecule components (where available) for designing and evaluating ADC constructs.

PROTAC

2,814

PROTAC and targeted protein degradation tools for discovery research. Browse degrader-related ligands, linkers, and building blocks (where available) to assemble or screen PROTAC designs, with clear identifiers for efficient selection.

Explore pathway-focused tool compounds to study and modulate key signaling cascades. Browse small molecules grouped by signaling pathway to support mechanism studies, phenotypic assays, and target validation, with clear identifiers for fast searching.

Find bioactive small molecules organized by protein target (DTO). Quickly locate tool compounds for specific targets and compare identifiers such as structure, CAS, and synonyms—plus supporting documents —to build screening and validation sets.

Shop small molecules and tool compounds organized by disease area (DOID). Discover chemical probes, libraries, and related products mapped to therapeutic areas to help assemble compound sets for screening, pathway exploration, and model studies.

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  1. 3-(1,1-difluoro-2-hydroxyethyl)phenol
    CAS: 1784557-02-3 PubChem CID: 105425734 Formula: C8H8F2O2 Molecular Weight: 174.15
    ◐ .Made to order · 8–12 wks Item #: D305211
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    Technical Identifiers
    IUPAC Name
    3-(1,1-difluoro-2-hydroxyethyl)phenol
    SMILES
    C1=CC(=CC(=C1)O)C(CO)(F)F
    InChIKey
    LAGNSTKGZBLWOE-UHFFFAOYSA-N
    InChI
    1S/C8H8F2O2/c9-8(10,5-11)6-2-1-3-7(12)4-6/h1-4,11-12H,5H2
  2. 3,4-diaminocyclobut-3-ene-1,2-dione
    CAS: 5231-89-0 EC Number: 848-257-5 Formula: C4H4N2O2 Molecular Weight: 112.09
    ● In Stock — US warehouse, ships to EU* Item #: D303885
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    Technical Identifiers
    IUPAC Name
    3,4-diaminocyclobut-3-ene-1,2-dione
    SMILES
    C1(=C(C(=O)C1=O)N)N
    InChIKey
    WUACDRFRFTWMHE-UHFFFAOYSA-N
    InChI
    1S/C4H4N2O2/c5-1-2(6)4(8)3(1)7/h5-6H2
    Synonyms
    3Q8TZB9ESJ | AKOS006221883 | di-aminocyclobutenedione | SCHEMBL1207344 | 3-Cyclobutene-1,2-dione, 3,4-diamino- | Z120...
  3. 3,4-dimethoxy-N-(5-methyl-1,2-oxazol-3-yl)benzamide
    CAS: 309951-18-6 Formula: C13H14N2O4 Molecular Weight: 262.26
    10mM in DMSO
    ◐ .Made to order · 8–12 wks Item #: D423200
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    IUPAC Name
    3,4-dimethoxy-N-(5-methyl-1,2-oxazol-3-yl)benzamide
    SMILES
    CC1=CC(=NO1)NC(=O)C2=CC(=C(C=C2)OC)OC
    InChIKey
    LZELTTNSPNYMCU-UHFFFAOYSA-N
    InChI
    1S/C13H14N2O4/c1-8-6-12(15-19-8)14-13(16)9-4-5-10(17-2)11(7-9)18-3/h4-7H,1-3H3,(H,14,15,16)
    Synonyms
    MLS001211925 | STK015603 | 3,4-Dimethoxy-N-(5-methyl-isoxazol-3-yl)-benzamide | 3,4-Dimethoxy-N-(5-methylisoxazol-3-y...
  4. 3,5,7,8-tetrahydro-2-methyl-4h-thiopyrano(4,3-d)pyrimidin-4-one
    CAS: 284028-90-6 PubChem CID: 135522417 Formula: C8H10N2OS Molecular Weight: 182.24
    ● In Stock — US warehouse, ships to EU* Item #: T120464
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    IUPAC Name
    2-methyl-3,5,7,8-tetrahydrothiopyrano[4,3-d]pyrimidin-4-one
    SMILES
    CC1=NC2=C(CSCC2)C(=O)N1
    InChIKey
    HRYKZAKEAVZGJD-UHFFFAOYSA-N
    InChI
    1S/C8H10N2OS/c1-5-9-7-2-3-12-4-6(7)8(11)10-5/h2-4H2,1H3,(H,9,10,11)
    Synonyms
    DR2313, >=98% (HPLC) | HMS3413D09 | AKOS006291031 | HY-105692 | 1,5,7,8-Tetrahydro-2-methyl-4H-thiopyrano[4,3-d]pyrim...
  5. 3-(Triallylsilyl)propyl Methacrylate
    CAS: 1990509-31-3 PubChem CID: 125401955 Formula: C16H26O2Si Molecular Weight: 278.47
    ≥92% with stabilizers
    ◐ .Made to order · 8–12 wks Item #: T302696
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    IUPAC Name
    3-tris(prop-2-enyl)silylpropyl 2-methylprop-2-enoate
    SMILES
    CC(=C)C(=O)OCCC[Si](CC=C)(CC=C)CC=C
    InChIKey
    DZQKPAZSDBDDET-UHFFFAOYSA-N
    InChI
    1S/C16H26O2Si/c1-6-11-19(12-7-2,13-8-3)14-9-10-18-16(17)15(4)5/h6-8H,1-4,9-14H2,5H3
    Synonyms
    1990509-31-3 | T3229 | D92679 | Methacrylic Acid 3-(Triallylsilyl)propyl Ester | 3-(TRIALLYLSILYL)PROPYL METHACRYLATE...
  6. 3-AQC
    CAS: 201216-42-4 PubChem CID: 11567402 Formula: C20H21N5O4 Molecular Weight: 395.42
    ● In Stock — US warehouse, ships to EU* Item #: A287758
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    IUPAC Name
    (Z)-but-2-enedioic acid;3-(4-prop-2-enylpiperazin-1-yl)quinoxaline-2-carbonitrile
    SMILES
    C=CCN1CCN(CC1)C2=NC3=CC=CC=C3N=C2C#N.C(=CC(=O)O)C(=O)O
    InChIKey
    UHLVYEOCPBNJNA-BTJKTKAUSA-N
    InChI
    1S/C16H17N5.C4H4O4/c1-2-7-20-8-10-21(11-9-20)16-15(12-17)18-13-5-3-4-6-14(13)19-16;5-3(6)1-2-4(7)8/h2-6H,1,7-11H2;1-2H,(H,5,6)(H,7,8)/b;2-1-
    Synonyms
    3-(4-Allylpiperazin-1-yl)-2-quinoxalinecarbonitrile maleate | 3-(4-allylpiperazin-1-yl)quinoxaline-2-carbonitrile fum...
  7. 3-Acetylquinoline
    CAS: 33021-53-3 EC Number: 688-991-1 Formula: C11H9NO Molecular Weight: 171.20
    Solid ≥97%
    ◐ .Made to order · 8–12 wks Item #: D303458
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    IUPAC Name
    1-quinolin-3-ylethanone
    SMILES
    CC(=O)C1=CC2=CC=CC=C2N=C1
    InChIKey
    VMZYRGLKJCRGST-UHFFFAOYSA-N
    InChI
    1S/C11H9NO/c1-8(13)10-6-9-4-2-3-5-11(9)12-7-10/h2-7H,1H3
    Synonyms
    J-503629 | A5900 | SCHEMBL530761 | 3-quinolylethanone | 3-Acetyl-chinolin | 3-Acetylquinoline | 1-quinolin-3-ylethano...
  8. Methyldopa
    CAS: 555-30-6 EC Number: 209-089-2 Formula: C10H13NO4 Molecular Weight: 211.22
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. 2mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: D424726
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    IUPAC Name
    (2S)-2-amino-3-(3,4-dihydroxyphenyl)-2-methylpropanoic acid
    SMILES
    CC(CC1=CC(=C(C=C1)O)O)(C(=O)O)N
    InChIKey
    CJCSPKMFHVPWAR-JTQLQIEISA-N
    InChI
    1S/C10H13NO4/c1-10(11,9(14)15)5-6-2-3-7(12)8(13)4-6/h2-4,12-13H,5,11H2,1H3,(H,14,15)/t10-/m0/s1
    Synonyms
    methyldopa|555-30-6|Alphamethyldopa|Dopamet|Alpha medopa|Methyldopa anhydrous|Baypresol|l-alpha-Methyldopa|Methyl dop...
  9. 3-(3,5-Di-tert-butyl-4-hydroxybenzylidenyl)­indolin-2-one
    CAS: 40526-64-5 Formula: C23H27NO2 Molecular Weight: 349.5
    ◐ .Made to order · 8–12 wks Item #: D341185
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    IUPAC Name
    3-[(3,5-ditert-butyl-4-hydroxyphenyl)methylidene]-1H-indol-2-one
    SMILES
    CC(C)(C)C1=CC(=CC(=C1O)C(C)(C)C)C=C2C3=CC=CC=C3NC2=O
    InChIKey
    NUMNJHZZSGKINB-UHFFFAOYSA-N
    InChI
    1S/C23H27NO2/c1-22(2,3)17-12-14(13-18(20(17)25)23(4,5)6)11-16-15-9-7-8-10-19(15)24-21(16)26/h7-13,25H,1-6H3,(H,24,26)
    Synonyms
    3-(3,5-Di-tert-butyl-4-hydroxybenzylidenyl)indolin-2-one | NUMNJHZZSGKINB-UHFFFAOYSA-N | 3-[(3,5-ditert-butyl-4-hydro...
  10. 3-(Dimethylphosphono)-N-methylolpropionamide
    CAS: 20120-33-6 Formula: C6H14NO5P Molecular Weight: 211.16
    ● In Stock — US warehouse, ships to EU* Item #: D302710
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    Technical Identifiers
    IUPAC Name
    3-dimethoxyphosphoryl-N-(hydroxymethyl)propanamide
    SMILES
    COP(=O)(CCC(=O)NCO)OC
    InChIKey
    MCONGYNHPPCHSD-UHFFFAOYSA-N
    InChI
    1S/C6H14NO5P/c1-11-13(10,12-2)4-3-6(9)7-5-8/h8H,3-5H2,1-2H3,(H,7,9)
    Synonyms
    3-(Dimethylphosphono)-N-methylolpropionamide|20120-33-6|3-dimethoxyphosphoryl-N-(hydroxymethyl)propanamide|Dimethyl (...
  11. 3-(Hydroxymethyl)-7-(phenylmethoxy)-1H-indole-1-carboxylic acid 1,1-dimethylethyl ester
    CAS: 914349-16-9 PubChem CID: 40428543 Formula: C21H23NO4 Molecular Weight: 353.42
    ● In Stock — US warehouse, ships to EU* Item #: B335979
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    Technical Identifiers
    IUPAC Name
    tert-butyl 3-(hydroxymethyl)-7-phenylmethoxyindole-1-carboxylate
    SMILES
    CC(C)(C)OC(=O)N1C=C(C2=C1C(=CC=C2)OCC3=CC=CC=C3)CO
    InChIKey
    QMFWWQIBMLWJTH-UHFFFAOYSA-N
    InChI
    1S/C21H23NO4/c1-21(2,3)26-20(24)22-12-16(13-23)17-10-7-11-18(19(17)22)25-14-15-8-5-4-6-9-15/h4-12,23H,13-14H2,1-3H3
    Synonyms
    DTXSID50654330 | PS-6993 | tert-Butyl 7-(benzyloxy)-3-(hydroxymethyl)-1H-indole-1-carboxylate | 7-Benzyloxy-3-hydroxy...
  12. 3-(Isopropylamino)-1,2-Propanediol
    CAS: 6452-57-9 Formula: C6H15NO2 Molecular Weight: 133.19
    ● In Stock — US warehouse, ships to EU* Item #: I304271
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    Technical Identifiers
    IUPAC Name
    3-(propan-2-ylamino)propane-1,2-diol
    SMILES
    CC(C)NCC(CO)O
    InChIKey
    YKBZGEJJKPNRSI-UHFFFAOYSA-N
    InChI
    1S/C6H15NO2/c1-5(2)7-3-6(9)4-8/h5-9H,3-4H2,1-2H3
    Synonyms
    FT-0695411 | SR-01000945042-1 | Z385465736 | 3-(Isopropylamino)propane-1,2-diol | 308N9VZ214 | DTXSID60983148 | FT-06...
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Frequently Asked Questions

What does the By Target/Pathway/Disease listing cover?
It groups compounds associated with targets in By Target/Pathway/Disease, organised so you can move from the pathway to an individual target and then to a specific chemotype. Each entry carries structure, CAS number, and reported activity.
How is By Target/Pathway/Disease organised?
By Target/Pathway/Disease is broken down into Compound Libraries, PROTACs, molecular glues and other degraders and Antibody-drug Conjugates(ADC). Compounds acting on more than one node appear under each relevant target.
How do I choose compounds for By Target/Pathway/Disease research?
For By Target/Pathway/Disease, pick a well-characterised reference compound for the node you want to perturb, and pair it with a structurally unrelated compound hitting the same target — that is the cleanest way to separate pathway effects from off-target ones. Check potency, selectivity, and cell permeability against your assay format. All products are supplied for professional research and development use only, and are not for use in humans, animals, diagnostics, or therapy.
How do I find a specific compound within By Target/Pathway/Disease?
Search By Target/Pathway/Disease by compound name, CAS number, or SMILES, or drill down through the target listing. Unlisted compounds and bulk quantities: [email protected]. We supply verified businesses, research institutions, universities, and government agencies.

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