By Target / Pathway / Disease

Explore small molecules, screening libraries, and tool compounds for discovery research. Browse by target, pathway, or ligand family to quickly find inhibitors, agonists, and chemical probes, with searchable structure/CAS data and supporting documents (SDS/COA where available).

136,942 products

Ready-to-screen compound libraries and focused sets for hit discovery. Browse libraries by target class, pathway, scaffold, or application, and review size, format, and compound information to build screening panels.Customize Your Screening Library to choose compounds, format, and volume, and we’ll prepare a ready-to-use set for you.Customize Your Screening Library

Navigate small molecules by ligand family or scaffold to build focused sets and explore structure–activity relationships. This category groups related chemotypes, helping you select analogs, fragments, and tool molecules for discovery research.

ADC-focused building blocks and tools to support antibody–drug conjugate research. Explore payloads, linkers, conjugation reagents, and related small-molecule components (where available) for designing and evaluating ADC constructs.

PROTAC

2,814

PROTAC and targeted protein degradation tools for discovery research. Browse degrader-related ligands, linkers, and building blocks (where available) to assemble or screen PROTAC designs, with clear identifiers for efficient selection.

Explore pathway-focused tool compounds to study and modulate key signaling cascades. Browse small molecules grouped by signaling pathway to support mechanism studies, phenotypic assays, and target validation, with clear identifiers for fast searching.

Find bioactive small molecules organized by protein target (DTO). Quickly locate tool compounds for specific targets and compare identifiers such as structure, CAS, and synonyms—plus supporting documents —to build screening and validation sets.

Shop small molecules and tool compounds organized by disease area (DOID). Discover chemical probes, libraries, and related products mapped to therapeutic areas to help assemble compound sets for screening, pathway exploration, and model studies.

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  1. Auxinole
    CAS: 86445-22-9 Formula: C20H19NO3 Molecular Weight: 321.37
    ● In Stock — US warehouse, ships to EU* Item #: A413687
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    IUPAC Name
    4-(2,4-dimethylphenyl)-2-(1H-indol-3-yl)-4-oxobutanoic acid
    SMILES
    CC1=CC(=C(C=C1)C(=O)CC(C2=CNC3=CC=CC=C32)C(=O)O)C
    InChIKey
    HGUYAIJBXSQXGV-UHFFFAOYSA-N
    InChI
    1S/C20H19NO3/c1-12-7-8-14(13(2)9-12)19(22)10-16(20(23)24)17-11-21-18-6-4-3-5-15(17)18/h3-9,11,16,21H,10H2,1-2H3,(H,23,24)
    Synonyms
    α-[2,4-dimethylphenylethyl-2-oxo]-IAA, α-[2-(2,4-Dimethylphenyl)-2-oxoethyl]-1H-indole-3-acetic acid
  2. Avacopan (CCX168), Antagonist of C5a 1 receptor
    CAS: 1346623-17-3 EC Number: 877-511-8 Formula: C33H35F4N3O2 Molecular Weight: 581.64
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. 10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: A421311
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    IUPAC Name
    (2R,3S)-2-[4-(cyclopentylamino)phenyl]-1-(2-fluoro-6-methylbenzoyl)-N-[4-methyl-3-(trifluoromethyl)phenyl]piperidine-3-carboxamide
    SMILES
    CC1=C(C(=CC=C1)F)C(=O)N2CCCC(C2C3=CC=C(C=C3)NC4CCCC4)C(=O)NC5=CC(=C(C=C5)C)C(F)(F)F
    InChIKey
    PUKBOVABABRILL-YZNIXAGQSA-N
    InChI
    1S/C33H35F4N3O2/c1-20-12-15-25(19-27(20)33(35,36)37)39-31(41)26-10-6-18-40(32(42)29-21(2)7-5-11-28(29)34)30(26)22-13-16-24(17-14-22)38-23-8-3-4-9-23/hshow more
    Synonyms
    (2R,3S)-2-[4-(Cyclopentylamino)phenyl]-1-(2-fluoro-6-methylbenzoyl)-N-[4-methyl-3-(trifluoromethyl)phenyl]-3-piperidi...
  3. Avagacestat, Gamma-secretase inhibitor
    CAS: 1146699-66-2 EC Number: 110-405-5 Formula: C20H17ClF4N4O4S Molecular Weight: 520.89
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. 10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: A420715
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    IUPAC Name
    (2R)-2-[(4-chlorophenyl)sulfonyl-[[2-fluoro-4-(1,2,4-oxadiazol-3-yl)phenyl]methyl]amino]-5,5,5-trifluoropentanamide
    SMILES
    C1=CC(=CC=C1S(=O)(=O)N(CC2=C(C=C(C=C2)C3=NOC=N3)F)C(CCC(F)(F)F)C(=O)N)Cl
    InChIKey
    XEAOPVUAMONVLA-QGZVFWFLSA-N
    InChI
    1S/C20H17ClF4N4O4S/c21-14-3-5-15(6-4-14)34(31,32)29(17(18(26)30)7-8-20(23,24)25)10-13-2-1-12(9-16(13)22)19-27-11-33-28-19/h1-6,9,11,17H,7-8,10H2,(H2,2show more
    Synonyms
    DB11893 | (2R)-2-[(4-chlorophenyl)sulfonyl-[[2-fluoro-4-(1,2,4-oxadiazol-3-yl)phenyl]methyl]amino]-5,5,5-trifluoropen...
  4. Avanafil, Phosphodiesterase 5A inhibitor
    CAS: 330784-47-9 EC Number: 841-424-3 Formula: C23H26ClN7O3 Molecular Weight: 483.95
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. 10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: A408935
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    Synonyms
    5-Pyrimidinecarboxamide, 4-[[(3-chloro-4-methoxyphenyl)methyl]amino]-2-[(2S)-2-(hydroxymethyl)-1-pyrrolidinyl]-N-(2-p...
  5. Azido-PEG2-CH2COOH
    CAS: 882518-90-3 Formula: C6H11N3O4 Molecular Weight: 189.17
    ● In Stock — US warehouse, ships to EU* Item #: A412701
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    IUPAC Name
    2-[2-(2-azidoethoxy)ethoxy]acetic acid
    SMILES
    C(COCCOCC(=O)O)N=[N+]=[N-]
    InChIKey
    OCIIYNXOTJRSHW-UHFFFAOYSA-N
    InChI
    1S/C6H11N3O4/c7-9-8-1-2-12-3-4-13-5-6(10)11/h1-5H2,(H,10,11)
    Synonyms
    Azide-PEG2-CH2COOH | Azido-PEG2-CH2COOH | 2-[2-(2-Azidoethoxy)ethoxy]acetic acid | N-(2-(2-(2-azidoethoxy)ethoxy))ace...
  6. Avadomide (CC-122), cereblon
    CAS: 1015474-32-4 EC Number: 876-404-3 Formula: C14H14N4O3 Molecular Weight: 286.29
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. 10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: A420319
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    IUPAC Name
    3-(5-amino-2-methyl-4-oxoquinazolin-3-yl)piperidine-2,6-dione
    SMILES
    CC1=NC2=CC=CC(=C2C(=O)N1C3CCC(=O)NC3=O)N
    InChIKey
    RSNPAKAFCAAMBH-UHFFFAOYSA-N
    InChI
    1S/C14H14N4O3/c1-7-16-9-4-2-3-8(15)12(9)14(21)18(7)10-5-6-11(19)17-13(10)20/h2-4,10H,5-6,15H2,1H3,(H,17,19,20)
    Synonyms
    2,6-Piperidinedione, 3-(5-amino-2-methyl-4-oxo-3(4H)-quinazolinyl)- | BDBM76986 | SCHEMBL282749 | 5,8-Dihydro-5,8-dio...
  7. Azathioprine, DNA inhibitor
    CAS: 446-86-6 EC Number: 207-175-4 Formula: C9H7N7O2S Molecular Weight: 277.26
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. 10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: A407927
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    Synonyms
    6-​[(1-​methyl-​4-​nitro-​1H-​imidazol-​5-​yl)​thio]​-9H-​purine
  8. Azelastine HCl, Histamine H1 receptor antagonist
    CAS: 79307-93-0 EC Number: 620-469-0 PubChem CID: 54360 Formula: C22H24ClN3O·HCl Molecular Weight: 418.36
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: A408950
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    Synonyms
    4-​[(4-​chlorophenyl)​methyl]​-​2-​(hexahydro-​1-​methyl-​1H-​azepin-​4-​yl)​-​1(2H)​-​phthalazinone, hydrochloride (...
  9. Azeliragon (TTP488), Advanced glycosylation end product-specific receptor antagonist
    CAS: 603148-36-3 EC Number: 814-441-9 Formula: C32H38ClN3O2 Molecular Weight: 532.12
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. 10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: A425011
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    IUPAC Name
    3-[4-[2-butyl-1-[4-(4-chlorophenoxy)phenyl]imidazol-4-yl]phenoxy]-N,N-diethylpropan-1-amine
    SMILES
    CCCCC1=NC(=CN1C2=CC=C(C=C2)OC3=CC=C(C=C3)Cl)C4=CC=C(C=C4)OCCCN(CC)CC
    InChIKey
    KJNNWYBAOPXVJY-UHFFFAOYSA-N
    InChI
    1S/C32H38ClN3O2/c1-4-7-9-32-34-31(25-10-16-28(17-11-25)37-23-8-22-35(5-2)6-3)24-36(32)27-14-20-30(21-15-27)38-29-18-12-26(33)13-19-29/h10-21,24H,4-9,2show more
    Synonyms
    3-(4-(2-Butyl-1-(4-(4-chlorophenoxy)phenyl)-1H-imidazol-4-yl)phenoxy)-N,N-diethylpropan-1-amine | 3-(4-{2-Butyl-1-[4-...
  10. Azido-PEG1-CH2CO2H
    CAS: 79598-48-4 Formula: C4H7N3O3 Molecular Weight: 145.12
    ◐ .Made to order · 8–12 wks Item #: A412705
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    Technical Identifiers
    IUPAC Name
    2-(2-azidoethoxy)acetic acid
    SMILES
    C(COCC(=O)O)N=[N+]=[N-]
    InChIKey
    USTXYASKHZDVMV-UHFFFAOYSA-N
    InChI
    1S/C4H7N3O3/c5-7-6-1-2-10-3-4(8)9/h1-3H2,(H,8,9)
  11. Azido-PEG4-CH2-Boc
    CAS: 864681-04-9 Formula: C14H27N3O6 Molecular Weight: 333.38
    ● In Stock — US warehouse, ships to EU* Item #: A412466
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    IUPAC Name
    tert-butyl 2-[2-[2-[2-(2-azidoethoxy)ethoxy]ethoxy]ethoxy]acetate
    SMILES
    CC(C)(C)OC(=O)COCCOCCOCCOCCN=[N+]=[N-]
    InChIKey
    SIOLYQZSIFQODW-UHFFFAOYSA-N
    InChI
    1S/C14H27N3O6/c1-14(2,3)23-13(18)12-22-11-10-21-9-8-20-7-6-19-5-4-16-17-15/h4-12H2,1-3H3
    Synonyms
    3,6,9,12-Tetraoxatetradecanoic acid, 14-azido-, 1,1-dimethylethyl ester
  12. Azido-PEG5-Boc
    CAS: 1448451-72-6 Formula: C16H31N3O7 Molecular Weight: 377.43
    ◐ .Made to order · 8–12 wks Item #: A412739
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    IUPAC Name
    tert-butyl 2-[2-[2-[2-[2-(2-azidoethoxy)ethoxy]ethoxy]ethoxy]ethoxy]acetate
    SMILES
    CC(C)(C)OC(=O)COCCOCCOCCOCCOCCN=[N+]=[N-]
    InChIKey
    OUBLZQPJPYRIKU-UHFFFAOYSA-N
    InChI
    1S/C16H31N3O7/c1-16(2,3)26-15(20)14-25-13-12-24-11-10-23-9-8-22-7-6-21-5-4-18-19-17/h4-14H2,1-3H3
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Frequently Asked Questions

What does the By Target/Pathway/Disease listing cover?
It groups compounds associated with targets in By Target/Pathway/Disease, organised so you can move from the pathway to an individual target and then to a specific chemotype. Each entry carries structure, CAS number, and reported activity.
How is By Target/Pathway/Disease organised?
By Target/Pathway/Disease is broken down into Compound Libraries, PROTACs, molecular glues and other degraders and Antibody-drug Conjugates(ADC). Compounds acting on more than one node appear under each relevant target.
How do I choose compounds for By Target/Pathway/Disease research?
For By Target/Pathway/Disease, pick a well-characterised reference compound for the node you want to perturb, and pair it with a structurally unrelated compound hitting the same target — that is the cleanest way to separate pathway effects from off-target ones. Check potency, selectivity, and cell permeability against your assay format. All products are supplied for professional research and development use only, and are not for use in humans, animals, diagnostics, or therapy.
How do I find a specific compound within By Target/Pathway/Disease?
Search By Target/Pathway/Disease by compound name, CAS number, or SMILES, or drill down through the target listing. Unlisted compounds and bulk quantities: [email protected]. We supply verified businesses, research institutions, universities, and government agencies.

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