By Target / Pathway / Disease

Explore small molecules, screening libraries, and tool compounds for discovery research. Browse by target, pathway, or ligand family to quickly find inhibitors, agonists, and chemical probes, with searchable structure/CAS data and supporting documents (SDS/COA where available).

136,942 products

Ready-to-screen compound libraries and focused sets for hit discovery. Browse libraries by target class, pathway, scaffold, or application, and review size, format, and compound information to build screening panels.Customize Your Screening Library to choose compounds, format, and volume, and we’ll prepare a ready-to-use set for you.Customize Your Screening Library

Navigate small molecules by ligand family or scaffold to build focused sets and explore structure–activity relationships. This category groups related chemotypes, helping you select analogs, fragments, and tool molecules for discovery research.

ADC-focused building blocks and tools to support antibody–drug conjugate research. Explore payloads, linkers, conjugation reagents, and related small-molecule components (where available) for designing and evaluating ADC constructs.

PROTAC

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PROTAC and targeted protein degradation tools for discovery research. Browse degrader-related ligands, linkers, and building blocks (where available) to assemble or screen PROTAC designs, with clear identifiers for efficient selection.

Explore pathway-focused tool compounds to study and modulate key signaling cascades. Browse small molecules grouped by signaling pathway to support mechanism studies, phenotypic assays, and target validation, with clear identifiers for fast searching.

Find bioactive small molecules organized by protein target (DTO). Quickly locate tool compounds for specific targets and compare identifiers such as structure, CAS, and synonyms—plus supporting documents —to build screening and validation sets.

Shop small molecules and tool compounds organized by disease area (DOID). Discover chemical probes, libraries, and related products mapped to therapeutic areas to help assemble compound sets for screening, pathway exploration, and model studies.

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  1. Clomethiazole, GABA-A receptor; anion channel positive allosteric modulator
    CAS: 533-45-9 EC Number: 208-565-7 Formula: C6H8ClNS Molecular Weight: 161.65
    Liquid
    ◐ .Made to order · 8–12 wks Item #: C348069
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    IUPAC Name
    5-(2-chloroethyl)-4-methyl-1,3-thiazole
    SMILES
    CC1=C(SC=N1)CCCl
    InChIKey
    PCLITLDOTJTVDJ-UHFFFAOYSA-N
    InChI
    1S/C6H8ClNS/c1-5-6(2-3-7)9-4-8-5/h4H,2-3H2,1H3
    Synonyms
    5-(2-Chloro-ethyl)-4-methyl-thiazole | 5-(2-CHLOROETHYL)-4-METHYLTHIAZOLE | SY101781 | Q417178 | SMR002529479 | Clome...
  2. Clomifene citrate
    CAS: 50-41-9 EC Number: 200-035-3 Formula: C26H28ClNO · C6H8O7 Molecular Weight: 598.08
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: C409201
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    Synonyms
    NSC 35770 | 2-​[4-​(2-​chloro-​1,​2-​diphenylethenyl)​phenoxy]​-​N,​N-​diethyl-​ethanamine, 2-​hydroxy-​1,​2,​3-​prop...
  3. Cl-amidine
    CAS: 1043444-18-3 Formula: C14H19ClN4O2.C2HF3O2 Molecular Weight: 424.80
    Liquid 10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: C409028
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    Synonyms
    Benzamide, N-​[(1S)​-​1-​(aminocarbonyl)​-​4-​[(2-​chloro-​1-​iminoethyl)​amino]​butyl]​-​, 2,​2,​2-​trifluoroacetate...
  4. Cladospirone bisepoxide
    CAS: 152607-03-9 PubChem CID: 10316810 Formula: C20H14O7 Molecular Weight: 366.32
    ◐ .Made to order · 8–12 wks Item #: C275675
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    Technical Identifiers
    IUPAC Name
    (1'S,2'S,3'R,5'R,7'R,11'S)-2',11'-dihydroxyspiro[2,4-dioxatricyclo[7.3.1.05,13]trideca-1(12),5,7,9(13),10-pentaene-3,6'-4,12-dioxatetracyclo[5.4.1.01,show more
    SMILES
    C1=CC2=C3C(=C1)OC4(C5C(O5)C(C67C4(O6)C(=O)C=CC7O)O)OC3=CC=C2
    InChIKey
    AUWGMDYISSBOED-CCNMWVGKSA-N
    InChI
    1S/C20H14O7/c21-12-7-8-13(22)19-18(12,27-19)16(23)15-17(24-15)20(19)25-10-5-1-3-9-4-2-6-11(26-20)14(9)10/h1-8,12,15-17,21,23H/t12-,15+,16-,17+,18-,19-show more
    Synonyms
    (1aR,6S,7S,7aR)-6,7-Dihydroxy-7,7a-dihydro-1aH-spiro[2a,6a-epoxynaphtho[2,3-b]oxirene-2,2'-naphtho[1,8-de][1,3]dioxin...
  5. Cladribine (RWJ 26251), DNA inhibitor
    CAS: 4291-63-8 EC Number: 636-978-6 Formula: C10H12ClN5O3 Molecular Weight: 285.69
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. 10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: C408380
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    Synonyms
    Leustatin, 2-CdA, 2-chlorodeoxyadenosine, 2-Chloro-2′-deoxyadenosine, CldAdo, Jk 6251, NSC 105014 | (2R,3S,5R)-5-(6-a...
  6. Clocortolone Pivalate, Glucocorticoid receptor agonist
    CAS: 34097-16-0 EC Number: 251-826-5 Formula: C27H36ClFO5 Molecular Weight: 495.02
    ● In Stock — US warehouse, ships to EU* Item #: C346588
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    IUPAC Name
    [2-[(6S,8S,9R,10S,11S,13S,14S,16R,17S)-9-chloro-6-fluoro-11-hydroxy-10,13,16-trimethyl-3-oxo-7,8,11,12,14,15,16,17-octahydro-6H-cyclopenta[a]phenanthrshow more
    SMILES
    CC1CC2C3CC(C4=CC(=O)C=CC4(C3(C(CC2(C1C(=O)COC(=O)C(C)(C)C)C)O)Cl)C)F
    InChIKey
    SXYZQZLHAIHKKY-GSTUPEFVSA-N
    InChI
    1S/C27H36ClFO5/c1-14-9-16-17-11-19(29)18-10-15(30)7-8-26(18,6)27(17,28)21(32)12-25(16,5)22(14)20(31)13-34-23(33)24(2,3)4/h7-8,10,14,16-17,19,21-22,32Hshow more
    Synonyms
    [2-[(6S,8S,9R,10S,11S,13S,14S,16R,17S)-9-chloro-6-fluoro-11-hydroxy-10,13,16-trimethyl-3-oxo-7,8,11,12,14,15,16,17-oc...
  7. Clebopride malate
    CAS: 57645-91-7 Formula: C24H30ClN3O7 Molecular Weight: 507.98
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: C424851
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    IUPAC Name
    4-amino-N-(1-benzylpiperidin-1-ium-4-yl)-5-chloro-2-methoxybenzamide;2,4-dihydroxy-4-oxobutanoate
    SMILES
    COC1=CC(=C(C=C1C(=O)NC2CC[NH+](CC2)CC3=CC=CC=C3)Cl)N.C(C(C(=O)[O-])O)C(=O)O
    InChIKey
    NYNKCGWJPNZJMI-UHFFFAOYSA-N
    InChI
    1S/C20H24ClN3O2.C4H6O5/c1-26-19-12-18(22)17(21)11-16(19)20(25)23-15-7-9-24(10-8-15)13-14-5-3-2-4-6-14;5-2(4(8)9)1-3(6)7/h2-6,11-12,15H,7-10,13,22H2,1Hshow more
    Synonyms
    clebopride malate|57645-91-7|Clebopride hydrogen malate|Clebopride malate [JAN]|4-amino-N-(1-benzylpiperidin-1-ium-4-...
  8. Clebopride malate
    CAS: 57645-91-7 Formula: C24H30ClN3O7 Molecular Weight: 507.98
    ● In Stock — US warehouse, ships to EU* Item #: C413462
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    Technical Identifiers
    IUPAC Name
    4-amino-N-(1-benzylpiperidin-1-ium-4-yl)-5-chloro-2-methoxybenzamide;2,4-dihydroxy-4-oxobutanoate
    SMILES
    COC1=CC(=C(C=C1C(=O)NC2CC[NH+](CC2)CC3=CC=CC=C3)Cl)N.C(C(C(=O)[O-])O)C(=O)O
    InChIKey
    NYNKCGWJPNZJMI-UHFFFAOYSA-N
    InChI
    1S/C20H24ClN3O2.C4H6O5/c1-26-19-12-18(22)17(21)11-16(19)20(25)23-15-7-9-24(10-8-15)13-14-5-3-2-4-6-14;5-2(4(8)9)1-3(6)7/h2-6,11-12,15H,7-10,13,22H2,1Hshow more
    Synonyms
    Clebopride malate [JAN] | 4-Amino-5-chloro-2-methoxy-N-(1-benzyl-4-piperidyl)benzamide malate | 4-amino-N-(1-benzylpi...
  9. Clemastine (HS-592) fumarate, Histamine H1 receptor antagonist
    CAS: 14976-57-9 EC Number: 239-055-2 PubChem CID: 5281069 Formula: C21H26ClNO·C4H4O4 Molecular Weight: 459.96
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: C408479
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    Synonyms
    Meclastine fumarate | Pyrrolidine, 2-[2-[(1R)-1-(4-chlorophenyl)-1-phenylethoxy]ethyl]-1-methyl-, (2R)-, (2E)-2-buten...
  10. Clemastine Fumarate, Histamine H1 receptor antagonist
    CAS: 14976-57-9 EC Number: 239-055-2 PubChem CID: 5281069 Formula: C21H26ClNO·C4H4O4 Molecular Weight: 459.96
    ● In Stock — US warehouse, ships to EU* Item #: C129211
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    IUPAC Name
    (E)-but-2-enedioic acid;(2R)-2-[2-[(1R)-1-(4-chlorophenyl)-1-phenylethoxy]ethyl]-1-methylpyrrolidine
    SMILES
    CC(C1=CC=CC=C1)(C2=CC=C(C=C2)Cl)OCCC3CCCN3C.C(=CC(=O)O)C(=O)O
    InChIKey
    PMGQWSIVQFOFOQ-YKVZVUFRSA-N
    InChI
    1S/C21H26ClNO.C4H4O4/c1-21(17-7-4-3-5-8-17,18-10-12-19(22)13-11-18)24-16-14-20-9-6-15-23(20)2;5-3(6)1-2-4(7)8/h3-5,7-8,10-13,20H,6,9,14-16H2,1-2H3;1-2show more
    Synonyms
    (R-(R*,R*))-2-(2-(1-(p-Chlorophenyl)-1-phenylethoxy)ethyl)-1-methylpyrrolidinium hydrogen fumarate | NCGC00180903-01 ...
  11. Clemizole, Channel blocker of TRPC3;Channel blocker of TRPC4;Channel blocker of TRPC5;Channel blocker of TRPC6
    CAS: 442-52-4 EC Number: 207-133-5 Formula: C19H20ClN3 Molecular Weight: 325.84
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. 10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: C423994
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    Technical Identifiers
    IUPAC Name
    1-[(4-chlorophenyl)methyl]-2-(pyrrolidin-1-ylmethyl)benzimidazole
    SMILES
    C1CCN(C1)CC2=NC3=CC=CC=C3N2CC4=CC=C(C=C4)Cl
    InChIKey
    CJXAEXPPLWQRFR-UHFFFAOYSA-N
    InChI
    1S/C19H20ClN3/c20-16-9-7-15(8-10-16)13-23-18-6-2-1-5-17(18)21-19(23)14-22-11-3-4-12-22/h1-2,5-10H,3-4,11-14H2
    Synonyms
    SR-01000000057-6 | BSPBio_000273 | CCG-106577 | Histakool | NCGC00015243-01 | NCGC00015243-07 | Oprea1_226569 | CLEMI...
  12. Cl-amidine TFA
    CAS: 1043444-18-3 Formula: C14H19ClN4O2.C2HF3O2 Molecular Weight: 424.80
    Solid ≥97%
    ● In Stock — US warehouse, ships to EU* Item #: C413918
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    Technical Identifiers
    IUPAC Name
    N-[(2S)-1-amino-5-[(1-amino-2-chloroethylidene)amino]-1-oxopentan-2-yl]benzamide;2,2,2-trifluoroacetic acid
    SMILES
    C1=CC=C(C=C1)C(=O)NC(CCCN=C(CCl)N)C(=O)N.C(=O)(C(F)(F)F)O
    InChIKey
    WUSNMVYWOLUWDD-MERQFXBCSA-N
    InChI
    1S/C14H19ClN4O2.C2HF3O2/c15-9-12(16)18-8-4-7-11(13(17)20)19-14(21)10-5-2-1-3-6-10;3-2(4,5)1(6)7/h1-3,5-6,11H,4,7-9H2,(H2,16,18)(H2,17,20)(H,19,21);(H,show more
    Synonyms
    (2S)-5-(2-Chloroethanimidamido)-2-(phenylformamido)pentanamide trifluoroacetic acid salt
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Frequently Asked Questions

What does the By Target/Pathway/Disease listing cover?
It groups compounds associated with targets in By Target/Pathway/Disease, organised so you can move from the pathway to an individual target and then to a specific chemotype. Each entry carries structure, CAS number, and reported activity.
How is By Target/Pathway/Disease organised?
By Target/Pathway/Disease is broken down into Compound Libraries, PROTACs, molecular glues and other degraders and Antibody-drug Conjugates(ADC). Compounds acting on more than one node appear under each relevant target.
How do I choose compounds for By Target/Pathway/Disease research?
For By Target/Pathway/Disease, pick a well-characterised reference compound for the node you want to perturb, and pair it with a structurally unrelated compound hitting the same target — that is the cleanest way to separate pathway effects from off-target ones. Check potency, selectivity, and cell permeability against your assay format. All products are supplied for professional research and development use only, and are not for use in humans, animals, diagnostics, or therapy.
How do I find a specific compound within By Target/Pathway/Disease?
Search By Target/Pathway/Disease by compound name, CAS number, or SMILES, or drill down through the target listing. Unlisted compounds and bulk quantities: [email protected]. We supply verified businesses, research institutions, universities, and government agencies.

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