5-ROX [5-Carboxy-X-rhodamine] - ≥95% , CAS No.216699-35-3

CAS: 216699-35-3 Cat. No.: R131183 Peso molecular: 534.602 Número EC: 683-410-8 PubChem CID: 4097103

GRADE & PURITY ≥95%

Synonyms

5-CXR | 5-Carboxy-X-rhodamine triethylamin salt | PD063557 | AKOS032953770 | 5-carboxy-X-rhodamine | 3-carboxy-4-(3-oxa-23-aza-9-azoniaheptacyclo[17.7.1.15,9.02,17.04,15.023,27.013,28]octacosa-1(27),2(17),4,9(28),13,15,18-heptaen-16-yl)benzoate | SCHEMBL5

Storage

Store at -20°C,Argon charged

Shipped In

Ice chest + Ice pads

Descripción general

5-ROX is a pure-5 isomer derived from carboxy-X-rhodamine. 5-ROX is a fluorescent oligonucleotide marker, acts as a donor molecule in FRET imaging coupled with porphyrins.
5-ROX is widely used for oligonucleotide labeling and automated DNA sequencing applications.

Specifications

Sinónimos

5-CXR | 5-Carboxy-X-rhodamine triethylamin salt | PD063557 | AKOS032953770 | 5-carboxy-X-rhodamine | 3-carboxy-4-(3-oxa-23-aza-9-azoniaheptacyclo[17.7.1.15, 9.02, 17.04, 15.023, 27.013, 28]octacosa-1(27), 2(17), 4, 9(28), 13, 15, 18-heptaen-16-yl)benzoate | SCHEMBL5

Especificaciones y pureza

≥95%

Mecanismos bioquímicos y fisiológicos

Fluorescent oligonucleotide marker. 6-ROX isomer. Acts as a donor molecule in FRET imaging coupled with porphyrins.

Condiciones de almacenamiento de almacenamiento

Store at -20°C, Argon charged

Enviado en

Ice chest + Ice pads

Este producto requiere envío en cadena de frío. Los servicios terrestres y otros servicios económicos no están disponibles.

Nota

Wherever possible, you should prepare and use solutions on the same day. However, if you need to make up stock solutions in advance, we recommend that you store the solution as aliquots in tightly sealed vials at -20°C. Generally, these will be useable for up to one month. Before use, and prior to opening the vial we recommend that you allow your product to equilibrate to room temperature for at least 1 hour. Need more advice on solubility, usage and handling? Please visit our frequently asked questions (FAQ) page for more details.

Pureza

≥95%

Nombres e identificadores

• Sonrisas canónicas: C1CC2=CC3=C(C4=C2N(C1)CCC4)OC5=C6CCC[N+]7=C6C(=CC5=C3C8=C(C=C(C=C8)C(=O)[O-])C(=O)O)CCC7
• IUPAC Name: 3-carboxy-4-(3-oxa-23-aza-9-azoniaheptacyclo[17.7.1.15,9.02,17.04,15.023,27.013,28]octacosa-1(27),2(17),4,9(28),13,15,18-heptaen-16-yl)benzoate
• InChIKey: UNGMOMJDNDFGJG-UHFFFAOYSA-N
• INCHI: 1S/C33H30N2O5/c36-32(37)20-9-10-21(24(17-20)33(38)39)27-25-15-18-5-1-11-34-13-3-7-22(28(18)34)30(25)40-31-23-8-4-14-35-12-2-6-19(29(23)35)16-26(27)31/h9-10,15-17H,1-8,11-14H2,(H-,36,37,38,39)
• Isómeros SMILES: C1CC2=CC3=C(C4=C2N(C1)CCC4)OC5=C6CCC[N+]7=C6C(=CC5=C3C8=C(C=C(C=C8)C(=O)[O-])C(=O)O)CCC7
• PubChem CID: 4097103
• Peso molecular: 534.602

Taxonomic Classification

Taxonomy Tree

• Kingdom Organic compounds
  • Superclass Organoheterocyclic compounds
    • Clase Benzopyrans
      • Subclass 1-benzopyrans
        • Level5 Dibenzopyrans
          • Level6 Xanthenes

• Kingdom: Organic compounds
• Superclass: Organoheterocyclic compounds
• Clase: Benzopyrans
• Subclass: 1-benzopyrans
• Intermediate Tree Nodes: Dibenzopyrans
• Direct Parent: Xanthenes
• Alternative Parents: M-phthalic acid and derivatives Diarylethers Hydroquinolines Benzoic acids Benzoyl derivatives Dialkylarylamines Aralkylamines Dicarboxylic acids and derivatives Amino acids Carboxylic acid salts Carboxylic acids Azacyclic compounds Oxacyclic compounds Organic oxides Organic salts Organic zwitterions Organopnictogen compounds Hydrocarbon derivatives
• Molecular Framework: Aromatic heteropolycyclic compounds
• Substituents: Xanthene - Meta_phthalic_acid - Diaryl ether - Tetrahydroquinoline - Benzoic acid or derivatives - Benzoic acid - Benzoyl - Dialkylarylamine - Tertiary aliphatic/aromatic amine - Aralkylamine - Monocyclic benzene moiety - Dicarboxylic acid or derivatives - Benzenoid - Amino acid or derivatives - Carboxylic acid salt - Amino acid - Tertiary amine - Azacycle - Oxacycle - Ether - Carboxylic acid - Carboxylic acid derivative - Organonitrogen compound - Hydrocarbon derivative - Amine - Organic oxide - Organopnictogen compound - Organic oxygen compound - Organooxygen compound - Organic salt - Organic nitrogen compound - Organic zwitterion - Aromatic heteropolycyclic compound
• Descripción: This compound belongs to the class of organic compounds known as xanthenes. These are polycyclic aromatic compounds containing a xanthene moiety, which consists of two benzene rings joined to each other by a pyran ring.
• External Descriptors: organic heteroheptacyclic compound

Data sources

1. Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS. ClassyFire: Automated Chemical Classification With A Comprehensive, Computable Taxonomy. Journal of Cheminformatics, 2016, 8:61.

DOI: 10.1186/s13321-016-0174-y

Propiedades químicas y físicas

• Solubilidad: Soluble in methanol, DMSO, and DMF
• Sensibilidad: Air & Light & Heat & Moisture sensitive
• Punto de fusión (°C): ≥250°C
• Peso molecular: 534.600 g/mol
• XLogP3: 4.400
• Hydrogen Bond Donor Count: 1
• Hydrogen Bond Acceptor Count: 6
• Rotatable Bond Count: 2
• Exact Mass: 534.215 Da
• Monoisotopic Mass: 534.215 Da
• Topological Polar Surface Area: 92.900 Ų
• Heavy Atom Count: 40
• Formal Charge: 0
• Complexity: 1200.000
• Isotope Atom Count: 0
• Defined Atom Stereocenter Count: 0
• Undefined Atom Stereocenter Count: 0
• Defined Bond Stereocenter Count: 0
• Undefined Bond Stereocenter Count: 0
• The total count of all stereochemical bonds: 0
• Covalently-Bonded Unit Count: 1