Technical articles

Reaction Selection in Small-Molecule Synthesis: From Transformation-Type Assessment to Experimental Route Screening

In small-molecule synthesis, the first question to answer is not “What reactions are available?” but rather “What type of transformation does this step belong to?” Only after the transformation type has been clearly identified can methods be screened against substrate features, target structure, and experimental constraints so that the route remains concise.
 
1. First determine which category the current transformation belongs to
 
Common synthetic problems can first be grouped into three categories. The purpose of the table below is to establish the starting point for route assessment.
 
Transformation Type
Core Question
Common Tasks
Functional group interconversion
Is the existing molecular framework basically usable, requiring only a change in functional group type or oxidation state?
Interconversion among alcohols, aldehydes, ketones, acids, esters, amines, halides, nitriles, epoxides, and related groups
Bond construction
Does the target molecule lack a key connection, such that a new carbon-carbon bond or carbon-heteroatom bond must be formed?
Addition, substitution, condensation, cross-coupling, acylation, amination
Skeletal modification
Is it necessary to change the ring system, chain length, or connectivity, rather than simply changing a functional group?
Cyclization, ring opening, rearrangement, homologation, skeletal reorganization
 
2. Substrate constraints and target structure jointly define the method space
 
Even for the same target transformation, the preferred method often changes when applied to different substrates. Route assessment cannot rely only on “which reactions are theoretically possible.” It must also begin with what the substrate can tolerate and what the target structure requires.
 
(1) First identify which sites must be preserved
 
Existing stereocenters, positions prone to racemization, acidic hydrogens, substituents liable to migrate, and aromatic or heteroaromatic rings that may undergo competing reactions can all directly affect route selection. When a substrate contains many structural elements that must remain unchanged, method screening should first assess whether those sites will be affected, and only then consider whether there is literature precedent for the reaction.
 
(2) Next identify which functional groups are sensitive to the reaction conditions
 
Acid, base, strong oxidation, strong reduction, metal catalysis, light, air, and moisture are not equivalent for all substrates. Whether a method is suitable depends first on whether the existing functional groups on the substrate can tolerate the relevant conditions.
 
(3) Then determine whether there are already usable reaction handles
 
If the molecule already contains existing reaction handles such as halides, boronate esters, alkenes, or carbonyl groups, it is often more direct to first compare conventional polar reactions or cross-coupling strategies. If the molecule already contains a usable directing group, then it is worth evaluating whether directed C-H functionalization should be introduced. If no preinstalled handle is available, the next step is to compare the feasibility of two routes: prefunctionalization followed by transformation, or direct site-selective functionalization.
 
(4) Finally, consider which stage of the route the current intermediate belongs to
 
Early-stage intermediates usually tolerate harsher conditions or skeletal modification more readily. Late-stage intermediates, by contrast, often place greater emphasis on functional group compatibility, site selectivity, and simple workup. The closer a molecule is to the final product, the higher the usual requirement for tolerance toward imperfect conditions.
 
Protection and deprotection steps are not forbidden, but they should not be the default starting point or the first option considered. Only when key sites truly interfere with the main transformation and no shorter route is available does the introduction of protecting groups become genuinely meaningful.
 
3. Use the target structure to determine the preferred class of methods
 
After evaluating the substrate, the analysis must return to the target structure. The target structure does not simply determine “which functional group must be installed in the end”; it determines which class of methods should be considered first.
 
Target Structure Feature
Priority Question
Preferred Methods
The framework is already in place, and only the functional group form is missing
Can the target be reached through a small number of functional group interconversions?
Oxidation, reduction, substitution, elimination, addition, hydrolysis, esterification, amidation
A key connection is missing
Should the new bond be formed early in the route, or assembled later?
Nucleophilic addition, condensation, substitution, cross-coupling
The target series requires rapid fragment replacement
Is modular assembly needed?
Cross-coupling, fragment-based assembly
The target requires late-stage local modification
Is it worth installing a handle in advance for a single site?
Photoredox catalysis, C-H functionalization
The target involves changes in ring system or chain length
Is skeletal modification required rather than simple functional group adjustment?
Cyclization, ring opening, rearrangement, homologation
 
The key at this stage is to first identify the transformation type that lies closest to the endpoint. If the target can be reached in two routine functional group interconversions, there is no need to introduce a higher-barrier method prematurely. If the target itself requires rapid fragment replacement, the value of cross-coupling rises substantially.
 
4. Preferred order for screening conventional synthetic routes
 
In the absence of clear structural limitations, convergence advantages, or process constraints, synthetic routes can usually be screened in an order from simpler to more complex. The benefit of this approach is that it allows one to compare methods with clearer operating conditions and more mature workup procedures first, and only then decide whether reaction systems with stricter requirements need to be introduced.
 
(1) First ask whether functional group interconversion can solve the problem
 
If the target framework is already present and only the functional group type or oxidation state is incorrect, functional group interconversion is usually the shortest and most direct route. Such steps are often logically straightforward, analytically simpler, and relatively easier to control upon scale-up.
 
(2) If functional group interconversion is not enough, then examine classical polar bond-forming reactions
 
When the target molecule lacks a clearly defined connection, priority should be given to classical polar reactions such as nucleophilic addition, substitution, condensation, acylation, and amination. The key questions for this class of methods are: which partner is the nucleophile, which is the electrophile, where side reactions may arise, and how stereochemistry can be controlled.
 
(3) If modular assembly is needed, then consider cross-coupling
 
The central value of cross-coupling lies in converting a linear route into a fragment-based assembly strategy. For targets that require rapid replacement of aryl, heteroaryl, alkenyl, or other defined fragments, this modular advantage is highly significant.
 
(4) When route length or structural complexity becomes a clear limitation, consider skeletal modification steps
 
Cyclization, rearrangement, ring opening, and homologation are all extremely important in total synthesis and in the construction of complex frameworks, but they are better deployed at points where they can clearly reshape route length and structural complexity, rather than being treated as the default starting method.
 
5. When to introduce expanded reaction platforms
 
When conventional routes cannot solve the problem efficiently, methods such as cross-coupling, photoredox catalysis, and C-H functionalization should be treated as priority options.
 
(1) Cross-coupling: when fragment-based assembly matters more than linear progression
 
If the target series requires frequent fragment replacement, or if the two fragments can each be prepared reliably on their own, cross-coupling can often significantly improve route flexibility. Its particular strength lies in modular assembly.
 
(2) Photoredox catalysis: when a single-electron pathway or mild radical conditions are needed
 
Photoredox catalysis relies on photoexcitation of the catalyst system to enter a single-electron regime. It is well suited to transformations that require mild radical generation, proceed through single-electron pathways, or are difficult to realize through conventional nucleophile-electrophile logic. It is useful for late-stage modification, radical bond formation, and scenarios in which redox processes are coupled with bond-forming events. At the same time, the wavelength and intensity of the light source, the reactor, light transmission efficiency, reaction mixture color, and the influence of oxygen can all significantly change the outcome.
 
(3) C-H functionalization: when the cost of prefunctionalization is too high
 
The most attractive feature of C-H functionalization is the possibility of bypassing the back-and-forth sequence of “install a reaction handle first, then carry out the transformation,” thereby compressing the route. The core questions for these methods are whether site selectivity has a sound basis, whether substrate compatibility is sufficient, and whether the relevant conditions are mature enough. It is not the default first choice, but it becomes more worthy of priority consideration when the cost of prefunctionalization is clearly too high and when site selectivity is supported by a clear rationale.
 
6. Reaction selection must ultimately be grounded in experimental conditions
 
Route design cannot stop at “methodologically feasible.” What often determines experimental success are condition compatibility, workup difficulty, and scale-up feasibility.
 
Evaluation Dimension
What Must Be Confirmed
Common Consequences
Chemoselectivity
Will other functional groups undergo competing reactions?
Lower yield, increased by-products
Site selectivity
Is the target site sufficiently differentiated?
Mixed isomers, difficult purification
Stereochemistry
Is there a risk of racemization, configurational inversion, or diastereomeric issues?
The entire downstream sequence is affected
Condition compatibility
Can the substrate tolerate acid/base, redox conditions, light, air, and moisture?
The reaction cannot be advanced reproducibly
Availability of the catalytic system
Are the catalyst, ligand, oxidant, and additives readily available and reusable?
Feasible in the literature, but difficult to reproduce experimentally
Workup difficulty
Are quenching, metal removal, decolorization, and separation straightforward?
Feasible on small scale, but blocked in scale-up
Safety and scale-up
What are the risks associated with exotherms, gas evolution, photochemical scale-up, and strong oxidants?
The route must be redesigned
 
For photoredox chemistry, the light source and reactor are part of the reaction conditions rather than auxiliary accessories. For cross-coupling, the catalyst, ligand, base, and metal-removal step are often equally critical. For C-H functionalization, site selectivity and substrate compatibility are usually more important to evaluate first than the isolated yield alone.
 
7. A practical sequence for route screening
 
The considerations above can be organized into a practical screening sequence for real-world use. When designing a route, the following seven steps can be applied in order.
 
1. First determine whether the current problem is one of functional group interconversion, bond construction, or skeletal modification.
2. Then identify which sites on the substrate must be preserved and which functional groups are sensitive to the reaction conditions.
3. Give priority to functional group interconversions that can move the intermediate directly closer to the target structure.
4. If a new connection must be formed, first compare classical polar bond-forming methods, and then compare whether cross-coupling is needed.
5. If prefunctionalization would clearly lengthen the route, then evaluate whether C-H functionalization is worth introducing.
6. If conventional two-electron pathways are difficult to advance, then assess whether photoredox catalysis can provide a new reaction channel.
7. Finally, judge the route on the basis of condition compatibility, workup, safety, and scale-up feasibility.
 
8. Navigation Table of Representative Chemicals Related to Reaction Selection in Small-Molecule Synthesis (Choose Table 1 to Table 5 by Research or Experimental Goal)
 
Research or Experimental Goal
Recommended Table to Consult First
Why Start with This Table
Recommended Tables to Cross-Reference
Navigation Guidance
The target framework is already available, and the goal is to complete functional group interconversion without altering the framework
Table 1
Table 1 focuses on oxidation, reduction, and selective functionalization reagents, making it suitable for first determining whether the current step involves oxidation-state adjustment, functional group replacement, or local functionalization
Table 2
First assess whether the transformation can be completed through direct oxidation-reduction or selective functionalization; if the substrate contains amine, acid, alcohol, or related sites, Table 2 can then be used to evaluate protection, deprotection, or activation steps
Carboxylic acids, amines, alcohols, or related starting materials need to be connected to construct amides, esters, ureas, carbonates, or similar bond types
Table 2
Table 2 covers carboxylic acid activation, coupling, protection/deprotection, and organic bases, making it suitable for first evaluating condensation pathways and the relevant condition window
Tables 1 and 3
First determine whether direct condensation is feasible or whether protection followed by coupling is required; if the target molecule will require further fragment assembly later, Table 3 can then be consulted to plan cross-coupling steps
The target molecule lacks a key aryl, heteroaryl, or alkenyl fragment and must be assembled in a modular manner
Table 3
Table 3 focuses on commonly used cross-coupling substrates, palladium sources, copper salts, and phosphine ligands, making it suitable for first evaluating whether Suzuki coupling, amination, or other coupling routes should be used
Tables 2 and 5
If boronate ester installation, amine protection, or substrate activation is needed before coupling, Table 2 can be consulted; if preinstalled reaction handles are to be avoided, the C-H functionalization routes in Table 5 can also be compared
The substrate already contains multiple sensitive functional groups, and the goal is to complete late-stage modification or radical bond formation under relatively mild conditions
Table 4
Table 4 focuses on visible-light photoredox catalysts, electron-transfer reagents, and organic hydrogen donors, making it suitable for first evaluating whether a transformation can be enabled through a single-electron pathway
Tables 1 and 5
If the target only requires localized redox adjustment, it can first be compared with conventional routes in Table 1; if directing-group-assisted or metal-mediated site activation is involved, Table 5 can also be consulted
Halogenation, borylation, or other prefunctionalization steps are to be avoided, and the goal is to directly modify an existing arene, heteroarene, or alkenyl site
Table 5
Table 5 focuses on metal systems, oxidants, and carboxylic acid additives commonly used in C-H functionalization, making it suitable for first evaluating whether direct site-selective transformation is possible
Tables 3 and 4
If direct activation is too difficult, one may return to Table 3 and choose a route involving prefunctionalization followed by coupling; if the target transformation is better suited to a radical pathway, it can also be compared with Table 4
At an early stage of route design, there is a need to quickly compare two strategies: “functional group interconversion first” versus “bond construction first, modification later”
Table 1
Table 1 helps first determine whether the existing intermediate can be brought closer to the target structure through direct oxidation, reduction, or selective functionalization
Tables 3 and 2
If the direct transformation requires fewer steps, Table 1 can be followed first; if the target lacks a key connection, Table 3 should then be considered; if protection and condensation are interspersed in the route, Table 2 should also be consulted
Multiple feasible routes exist for the same target molecule, and there is a need to compare conventional polar pathways with radical pathways
Tables 1 and 4
Table 1 represents conventional functional group interconversion logic, while Table 4 represents light-driven single-electron logic; comparing the two helps clarify the difference in reaction modes
Tables 3 and 5
If neither pathway directly solves the key bond-forming problem, Table 3 can be consulted further; if shortening prefunctionalization steps is desired, Table 5 can then be compared
The project is in the method-development stage, and the goal is to screen conditions around catalytic systems rather than fix a single route from the outset
Tables 3, 4, and 5
These three tables correspond respectively to cross-coupling, photoredox catalysis, and C-H functionalization, making them suitable for separate screening by reaction mode
Tables 1 and 2
After the catalytic system has been selected, return to Tables 1 and 2 to complete substrate pretreatment, subsequent functional group interconversion, or protection/deprotection planning
Sensitive fragments will only be introduced at a late stage of the target molecule, so the goal is to build the framework first and fine-tune it later
Table 3
Table 3 is suitable for completing fragment assembly and framework construction first, making it easier to leave high-risk functional groups for later-stage processing
Tables 1 and 4
After the framework has been assembled, Table 1 can be used for fine functional group adjustment; if late-stage modification requires high functional group compatibility, Table 4 can also be consulted
The aim is to reduce route complexity from the standpoint of spectral analysis, separation, and workup
Tables 1 and 2
The reaction types represented by these two tables are often easier to optimize from the standpoint of intermediate analysis, protection strategy, and control of condensation by-products
Table 3
If cross-coupling must be used, Table 3 can then be revisited to choose more familiar substrate combinations and catalytic systems, thereby reducing the workup burden
 
Table 1 | Oxidation, Reduction, and Selective Functionalization Reagents for Functional Group Interconversion
 
Category
CAS No.
Aladdin Catalog No.
Name
Specification or Purity
Product Features and Applications
Strong reducing agent
16853-85-3
L432195
Lithium aluminium hydride (LAH)
suitable for synthesis, powder
A strong hydride reducing agent for deep reduction of esters, acids, amides, nitriles, and related substrates; commonly used in early-stage route steps for framework simplification and functional group rollback
Mild reducing agent
16940-66-2
S432207
Sodium borohydride
purum p.a., ≥96%
A mild reducing agent suitable for the reduction of aldehydes, ketones, and some imines or activated carbonyl compounds; appropriate for condition screening with multifunctional substrates
Catalytic oxidation reagent
2564-83-2
TEMPO
sublimed grade, ≥99%
A stable nitroxyl radical used for the selective oxidation of alcohols; it can also participate in electrochemical or photoredox radical transformations
Hypervalent iodine oxidant
87413-09-0
Dess-Martin Periodinane (DMP)
≥96%
A mild hypervalent iodine oxidant for converting primary and secondary alcohols into aldehydes and ketones; suitable for late-stage transformations of substrates containing multiple functional groups
Peracid oxidant
937-14-4
3-Chloroperoxybenzoic acid (MCPBA)
≥85%
Commonly used for alkene epoxidation, sulfide oxidation, and Baeyer-Villiger oxidation; a widely used oxidation tool in functional group interconversion
Hypervalent iodine oxidant
3240-34-4
Iodobenzene diacetate (DIB)
≥98%
A hypervalent iodine oxidant that can be used in alcohol oxidation, deprotection, rearrangement, and radical oxidation steps; it can also serve as an oxidant in certain hypervalent iodine-mediated transformations
Electrophilic fluorinating / nitrogen-transfer reagent
133745-75-2
N-Fluorobenzenesulfonimide (NFSI)
≥97%
Can be used for electrophilic fluorination, amination, and radical functionalization; suitable for reaction design requiring comparison between oxidative pathways and functional group installation pathways
Electrophilic fluorinating reagent / oxidant
140681-55-6
N-Fluoro-N'-(chloromethyl)triethylenediamine Bis(tetrafluoroborate)
≥95%
A commonly used electrophilic fluorinating reagent that can also serve as an oxidant in radical activation and certain C-H functionalization systems
 
Table 2 | Carboxylic Acid Activation, Amidation, Protection/Deprotection, and Organic Bases
 
Category
CAS No.
Aladdin Catalog No.
Name
Specification or Purity
Product Features and Applications
Strong-acid deprotection reagent
76-05-1
Trifluoroacetic acid (TFA)
anhydrous, ≥99%
A commonly used strong-acid deprotection reagent for tert-butoxycarbonyl removal, treatment of acid-sensitive intermediates, and preparation of amine salts
Hindered organic base
7087-68-5
N,N-Diisopropylethylamine
distilled grade, ≥99.5%
A hindered organic base used as an acid scavenger or electron donor in amidation, coupling, and photoredox systems
Acyl-transfer catalyst
1122-58-3
4-Dimethylaminopyridine
≥99%
An acyl-transfer catalyst used in esterification, acylation, carbonate formation, and transformations of activated carboxylic acid derivatives
Carbodiimide coupling reagent
538-75-0
N,N′-Dicyclohexylcarbodiimide
≥99%
A dehydrative coupling reagent used for coupling carboxylic acids with amines or alcohols; also commonly used in the construction of anhydrides, lactams, and related structures
Carbonyl-activation reagent
530-62-1
N,N'-Carbonyldiimidazole (CDI)
≥99%
Activates carboxylic acids, alcohols, and amines to generate acyl imidazole or carbonylated intermediates for amidation, esterification, urea formation, and cyclization reactions
Uronium coupling reagent
148893-10-1
HATU
≥99%
Commonly used for amide bond formation when substrates are sterically hindered or when high coupling efficiency is required
Amine protecting reagent
24424-99-5
Di-tert-butyl dicarbonate
≥99%
A commonly used amine protecting reagent for selective protection of amino groups, facilitating separation of reactive sites in multistep routes
Uronium coupling reagent
94790-37-1
HBTU
≥99%
A commonly used amidation reagent for coupling carboxylic acids with amines and for rapid condensation in multistep routes
Water-soluble carbodiimide coupling reagent
25952-53-8
N-(3-Dimethylaminopropyl)-N′-ethylcarbodiimide hydrochloride
≥98%
A water-soluble coupling reagent used for amidation, esterification, and condensation systems where cleaner workup is desired
Phosphonium coupling reagent
128625-52-5
1H-Benzotriazol-1-yloxytripyrrolidinophosphonium Hexafluorophosphate
≥98%
A phosphonium coupling reagent used for amide bond formation and condensation reactions of sterically hindered substrates
 
Table 3 | Common Substrates, Metal Catalysts, and Ligands for Cross-Coupling
 
Category
CAS No.
Aladdin Catalog No.
Name
Specification or Purity
Product Features and Applications
Copper catalyst
7681-65-4
Copper(I) iodide
anhydrous, ≥99.995% metals basis
Used in Ullmann-type coupling, alkynylation, and cross-coupling systems operating cooperatively with palladium; it can also participate in certain photochemical or radical transformations
Palladium(II) precatalyst
3375-31-3
Palladium(II) acetate (47% Pd)
suitable for synthesis
A commonly used palladium precatalyst that can be combined with phosphine ligands for Suzuki coupling, Buchwald-Hartwig amination, the Heck reaction, and some C-H functionalization systems
Aryl bromide substrate
108-86-1
Bromobenzene
Standard for GC, ≥99.5% (GC)
A representative aryl bromide substrate for condition exploration in Suzuki coupling, Ullmann-type coupling, Grignard reagent coupling, and related transformations
Palladium(0) precatalyst
14221-01-3
Tetrakis(triphenylphosphine)palladium(0)
Pd ≥8.9%
A palladium(0) precatalyst that can be used directly in cross-coupling reactions such as Suzuki, Stille, and Sonogashira coupling
Palladium(0) source
51364-51-3
Tris(dibenzylideneacetone)dipalladium(0)
≥99.95% metals basis
An active palladium source that can be combined with monophosphine or diphosphine ligands for developing carbon-nitrogen, carbon-carbon, and carbon-oxygen coupling conditions
Organoboron coupling substrate
98-80-6
Phenylboronic acid (PBA) (contains varying amounts of Anhydride)
≥99.5%
A commonly used organoboron substrate for Suzuki coupling, oxidation to phenols, and studies of boronic acid derivative transformations
Diphosphine ligand
12150-46-8
1,1'-Bis(diphenylphosphino)ferrocene (DPPF)
≥99%
A commonly used diphosphine ligand that forms stable catalytic systems with palladium and other metals for cross-coupling and reductive coupling condition screening
Borylation reagent
73183-34-3
Bis(pinacolato)diboron
≥99%
A commonly used borylation reagent for borylation, metal-catalyzed borylation, and the preparation of precursors for subsequent Suzuki coupling
Aryl iodide substrate
591-50-4
Iodobenzene
≥99%
A relatively reactive aryl iodide substrate for evaluation of coupling, metalation, and radical arylation conditions
Diphosphine ligand
98327-87-8
2,2′-Bis(diphenylphosphino)-1,1′-binaphthalene
≥98%
A commonly used diphosphine ligand for palladium-, rhodium-, and ruthenium-catalyzed coupling, as well as screening of asymmetric catalytic conditions
Buchwald-type monophosphine ligand
787618-22-8
2-Dicyclohexylphosphino-2′,6′-diisopropoxybiphenyl
≥98%
Used in palladium-catalyzed carbon-nitrogen and carbon-oxygen bond formation, including some relatively difficult coupling substrates
Buchwald-type monophosphine ligand
657408-07-6
2-Dicyclohexylphosphino-2′,6′-dimethoxybiphenyl
≥98%
Used in cross-coupling reactions such as Suzuki coupling and Buchwald-Hartwig amination; suitable for comparing the influence of steric and electronic effects on catalytic activity
Buchwald-type monophosphine ligand
1070663-78-3
Dicyclohexyl(2',4',6'-triisopropyl-3,6-dimethoxy-[1,1'-biphenyl]-2-yl)phosphine
≥97%
Used for carbon-nitrogen and carbon-oxygen coupling of relatively difficult-to-activate substrates such as aryl chlorides
Buchwald-type monophosphine ligand
564483-18-7
2-Dicyclohexylphosphino-2',4',6'-triisopropylbiphenyl (X-Phos)
≥97%
Commonly used in Suzuki coupling, Buchwald-Hartwig amination, and certain carbon-sulfur bond-forming systems
 
Table 4 | Visible-Light Photoredox Catalysts and Electron-Transfer Reagents
 
Category
CAS No.
Aladdin Catalog No.
Name
Specification or Purity
Product Features and Applications
Iridium photocatalyst
94928-86-6
Tris[2-phenylpyridinato-C2,N]iridium(III)
sublimed grade
A classic iridium photocatalyst for condition screening in radical addition, dehalogenation, and cross-coupling enhancement
Ruthenium photocatalyst
50525-27-4
Tris(2,2′-bipyridyl)dichlororuthenium(II) hexahydrate
≥99.95% metals basis
A classic ruthenium photocatalyst for visible-light condition exploration in oxidative-quenching or reductive-quenching radical reactions
Organic photocatalyst
1416881-52-1
2,4,5,6-tetrakis(carbazol-9-yl)-1,3-dicyanobenzene
≥99% (HPLC)
An organic photoredox catalyst for metal-free reductive or oxidative transformations, decarboxylative coupling, and late-stage functionalization
Iridium photocatalyst
870987-63-6
(4,4'-Di-tert-butyl-2,2'-bipyridine)bis[3,5-difluoro-2-[5-trifluoromethyl-2-pyridinyl-κN)phenyl-κC]iridium(III) Hexafluorophosphate
≥99%
A strongly oxidizing iridium photocatalyst suitable for activation of substrates with high oxidation potentials, radical addition, and late-stage functionalization
Organic reductant / hydrogen donor
1149-23-1
Diethyl 1,4-Dihydro-2,6-dimethyl-3,5-pyridinedicarboxylate
≥98% (HPLC)
A commonly used organic hydrogen donor for photoredox reductive-quenching systems, dehalogenation, reductive coupling, and hydrogen-atom transfer processes
Organic photocatalyst
1442433-71-7
9-Mesityl-10-methylacridinium tetrafluoroborate
≥97%
An organic photocatalyst for anti-Markovnikov hydrofunctionalization of alkenes, oxidative radical addition, and late-stage functionalization
Organic dye photocatalyst
15086-94-9
Eosin Y (AMI-5)
≥95%
An organic dye photocatalyst for visible-light radical addition, reductive dehalogenation, and oxidative coupling
Organic dye photocatalyst
632-69-9
Rose bengal
≥95%
An organic dye photosensitizer for transformations involving singlet oxygen, oxidative conversion, and visible-light radical processes
 
Table 5 | Common Metal Systems, Oxidants, and Additives for C-H Functionalization and Advanced Catalytic Transformations
 
Category
CAS No.
Aladdin Catalog No.
Name
Specification or Purity
Product Features and Applications
External oxidant
7727-21-1
Potassium persulfate
analytical grade, ≥99.5%
A commonly used external oxidant for radical oxidation, decarboxylation, sulfate radical generation, and certain photoredox or C-H functionalization systems
Ruthenium precatalyst
14898-67-0
Ruthenium(III) chloride hydrate
suitable for analysis, premium grade
A ruthenium precatalyst for oxidation, transfer hydrogenation, and some ruthenium-catalyzed C-H functionalization systems
Copper salt oxidant / additive
6046-93-1
Copper(II) acetate monohydrate
suitable for analysis, ACS, premium grade
A commonly used copper salt oxidant or additive for oxidative coupling, Chan-Lam coupling, and certain reoxidation steps in C-H activation
Pentamethylcyclopentadienyl rhodium precatalyst
12354-85-7
C431633
Chiralyst P618
Umicore
Commonly used in directing-group-assisted C-H functionalization of arenes, alkenes, and heteroarenes, and also in rhodium-catalyzed cyclization and insertion reactions
Rhodium salt precatalyst
20765-98-4
Rhodium Chloride Hydrate
Rh 38.5-42.5%
A rhodium salt precatalyst for oxidation, addition, and some rhodium-catalyzed C-H activation and cyclization systems
Silver salt additive
563-63-3
Silver acetate
AR, ≥99.5%
A commonly used silver salt additive for halide abstraction, reoxidation, and promotion of certain C-H activation steps
Carboxylic acid additive
75-98-9
Pivalic acid (PA)
≥99%
A commonly used carboxylic acid additive that can promote metalation and deprotonation steps in certain C-H activation systems and can also modulate catalytic activity
Pentamethylcyclopentadienyl iridium precatalyst
12354-84-6
Pentamethylcyclopentadienyliridium(III) chloride,dimer
≥98%
An iridium precatalyst for directing-group-assisted C-H activation, alkene insertion, and oxidative coupling
Arene ruthenium precatalyst
52462-29-0
Dichloro(p-cymene)ruthenium dimer
≥97% (T)
A ruthenium precatalyst for transfer hydrogenation, C-H activation of alkenes or arenes, and cyclization reactions
 
Note: The products above are representative Aladdin products. For additional product specifications, search by “product name/CAS/catalog number” on the Aladdin website.
 
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Categories: Technical articles
Explore topics: Small-Molecule Synthesis

Da — when not otherwise indicated, molecular weight units are daltons.   Mw — weight-average molecular weight.   Mn — number-average molecular weight.

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Cite this article

Aladdin Scientific. "Reaction Selection in Small-Molecule Synthesis: From Transformation-Type Assessment to Experimental Route Screening" Aladdin Knowledge Base, updated 29 abr 2026. https://www.aladdinsci.com/us_es/faqs/from-transformation-type-assessment-to-experimental-route-screening-en.html
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