By Target / Pathway / Disease

Explore small molecules, screening libraries, and tool compounds for discovery research. Browse by target, pathway, or ligand family to quickly find inhibitors, agonists, and chemical probes, with searchable structure/CAS data and supporting documents (SDS/COA where available).

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Ready-to-screen compound libraries and focused sets for hit discovery. Browse libraries by target class, pathway, scaffold, or application, and review size, format, and compound information to build screening panels.Customize Your Screening Library to choose compounds, format, and volume, and we’ll prepare a ready-to-use set for you.Customize Your Screening Library

Navigate small molecules by ligand family or scaffold to build focused sets and explore structure–activity relationships. This category groups related chemotypes, helping you select analogs, fragments, and tool molecules for discovery research.

ADC-focused building blocks and tools to support antibody–drug conjugate research. Explore payloads, linkers, conjugation reagents, and related small-molecule components (where available) for designing and evaluating ADC constructs.

PROTAC

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PROTAC and targeted protein degradation tools for discovery research. Browse degrader-related ligands, linkers, and building blocks (where available) to assemble or screen PROTAC designs, with clear identifiers for efficient selection.

Explore pathway-focused tool compounds to study and modulate key signaling cascades. Browse small molecules grouped by signaling pathway to support mechanism studies, phenotypic assays, and target validation, with clear identifiers for fast searching.

Find bioactive small molecules organized by protein target (DTO). Quickly locate tool compounds for specific targets and compare identifiers such as structure, CAS, and synonyms—plus supporting documents —to build screening and validation sets.

Shop small molecules and tool compounds organized by disease area (DOID). Discover chemical probes, libraries, and related products mapped to therapeutic areas to help assemble compound sets for screening, pathway exploration, and model studies.

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  1. CPI-455 HCl
    CAS: 2095432-28-1 PubChem CID: 129896721 Formula: C16H15ClN4O Molecular Weight: 314.77
    ● In Stock — US warehouse, ships to EU* Item #: C413962
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    IUPAC Name
    7-oxo-5-phenyl-6-propan-2-yl-1H-pyrazolo[1,5-a]pyrimidine-3-carbonitrile;hydrochloride
    SMILES
    CC(C)C1=C(N=C2C(=CNN2C1=O)C#N)C3=CC=CC=C3.Cl
    InChIKey
    SNODPNXOTKXHHH-UHFFFAOYSA-N
    InChI
    1S/C16H14N4O.ClH/c1-10(2)13-14(11-6-4-3-5-7-11)19-15-12(8-17)9-18-20(15)16(13)21;/h3-7,9-10,18H,1-2H3;1H
    Synonyms
    4,​7-​dihydro-​6-​(1-​methylethyl)​-​7-​oxo-​5-​phenyl-Pyrazolo[1,​5-​a]​pyrimidine-​3-​carbonitrile hydrochloride | ...
  2. CPI-613
    CAS: 95809-78-2 Formula: C22H28O2S2 Molecular Weight: 388.59
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. ≥98%
    ● In Stock — US warehouse, ships to EU* Item #: C127954
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    IUPAC Name
    6,8-bis(benzylsulfanyl)octanoic acid
    SMILES
    C1=CC=C(C=C1)CSCCC(CCCCC(=O)O)SCC2=CC=CC=C2
    InChIKey
    ZYRLHJIMTROTBO-UHFFFAOYSA-N
    InChI
    1S/C22H28O2S2/c23-22(24)14-8-7-13-21(26-18-20-11-5-2-6-12-20)15-16-25-17-19-9-3-1-4-10-19/h1-6,9-12,21H,7-8,13-18H2,(H,23,24)
    Synonyms
    CPI 613 | CAS_1917 | E76113IR49 | 6,8-bis(benzylthio)octanoic acid | DEVIMISTAT [INN] | Q27276958 | AS-16613 | UNII-E...
  3. CPI-637
    CAS: 1884712-47-3 Formula: C22H22N6O Molecular Weight: 386.45
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: C422308
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    IUPAC Name
    (4R)-4-methyl-6-[1-methyl-3-(1-methylpyrazol-4-yl)indazol-5-yl]-1,3,4,5-tetrahydro-1,5-benzodiazepin-2-one
    SMILES
    CC1CC(=O)NC2=CC=CC(=C2N1)C3=CC4=C(C=C3)N(N=C4C5=CN(N=C5)C)C
    InChIKey
    BFTKDWYIRJGJCA-CYBMUJFWSA-N
    InChI
    1S/C22H22N6O/c1-13-9-20(29)25-18-6-4-5-16(22(18)24-13)14-7-8-19-17(10-14)21(26-28(19)3)15-11-23-27(2)12-15/h4-8,10-13,24H,9H2,1-3H3,(H,25,29)/t13-/m1/show more
    Synonyms
    2H-​1,​5-​Benzodiazepin-​2-​one,1,​3,​4,​5-​tetrahydro-​4-​methyl-​6-​[1-​methyl-​3-​(1-​methyl-​1H-​pyrazol-​4-​yl)​-�...
  4. CPI-637
    CAS: 1884712-47-3 Formula: C22H22N6O Molecular Weight: 386.45
    ● In Stock — US warehouse, ships to EU* Item #: C413937
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    IUPAC Name
    (4R)-4-methyl-6-[1-methyl-3-(1-methylpyrazol-4-yl)indazol-5-yl]-1,3,4,5-tetrahydro-1,5-benzodiazepin-2-one
    SMILES
    CC1CC(=O)NC2=CC=CC(=C2N1)C3=CC4=C(C=C3)N(N=C4C5=CN(N=C5)C)C
    InChIKey
    BFTKDWYIRJGJCA-CYBMUJFWSA-N
    InChI
    1S/C22H22N6O/c1-13-9-20(29)25-18-6-4-5-16(22(18)24-13)14-7-8-19-17(10-14)21(26-28(19)3)15-11-23-27(2)12-15/h4-8,10-13,24H,9H2,1-3H3,(H,25,29)/t13-/m1/show more
    Synonyms
    (S)-4-methyl-6-(1-methyl-3-(1-methyl-1H-pyrazol-4-yl)-1H-indazol-5-yl)-4,5-dihydro-1H-benzo[b][1,4]diazepin-2(3H)-one
  5. CPI203, Inhibitor of bromodomain containing 4
    CAS: 1446144-04-2 Formula: C19H18ClN5OS Molecular Weight: 399.9
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. 10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: C421639
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    IUPAC Name
    2-[(9S)-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.02,6]trideca-2(6),4,7,10,12-pentaen-9-yl]acetamide
    SMILES
    CC1=C(SC2=C1C(=NC(C3=NN=C(N32)C)CC(=O)N)C4=CC=C(C=C4)Cl)C
    InChIKey
    QECMENZMDBOLDR-AWEZNQCLSA-N
    InChI
    1S/C19H18ClN5OS/c1-9-10(2)27-19-16(9)17(12-4-6-13(20)7-5-12)22-14(8-15(21)26)18-24-23-11(3)25(18)19/h4-7,14H,8H2,1-3H3,(H2,21,26)/t14-/m0/s1
    Synonyms
    (6S)-4-(4-Chlorophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepine-6-acetamide
  6. CPTH2
    CAS: 357649-93-5 Formula: C14H14ClN3S Molecular Weight: 291.8
    10mM in DMSO
    ◐ .Made to order · 8–12 wks Item #: C423610
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    IUPAC Name
    4-(4-chlorophenyl)-N-(cyclopentylideneamino)-1,3-thiazol-2-amine
    SMILES
    C1CCC(=NNC2=NC(=CS2)C3=CC=C(C=C3)Cl)C1
    InChIKey
    YYTHPXHGWSAKIZ-UHFFFAOYSA-N
    InChI
    1S/C14H14ClN3S/c15-11-7-5-10(6-8-11)13-9-19-14(16-13)18-17-12-3-1-2-4-12/h5-9H,1-4H2,(H,16,18)
    Synonyms
    N-[4-(4-Chloro-phenyl)-thiazol-2-yl]-N'-cyclopentylidene-hydrazine | 4-(4-chlorophenyl)-2-(2-cyclopentylidenehydrazin...
  7. CPYPP
    CAS: 310460-39-0 Formula: C18H13ClN2O2 Molecular Weight: 324.76
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: C423203
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    IUPAC Name
    (4E)-4-[(E)-3-(2-chlorophenyl)prop-2-enylidene]-1-phenylpyrazolidine-3,5-dione
    SMILES
    C1=CC=C(C=C1)N2C(=O)C(=CC=CC3=CC=CC=C3Cl)C(=O)N2
    InChIKey
    VVZJFICTTKPNCK-KVDBUQHUSA-N
    InChI
    1S/C18H13ClN2O2/c19-16-12-5-4-7-13(16)8-6-11-15-17(22)20-21(18(15)23)14-9-2-1-3-10-14/h1-12H,(H,20,22)/b8-6+,15-11+
    Synonyms
    4-[3-(2-Chlorophenyl)-2-propen-1-ylidene]-1-phenyl-3,5-pyrazolidinedione
  8. CPYPP
    CAS: 310460-39-0 Formula: C18H13ClN2O2 Molecular Weight: 324.76
    ● In Stock — US warehouse, ships to EU* Item #: C286570
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    Technical Identifiers
    IUPAC Name
    (4E)-4-[(E)-3-(2-chlorophenyl)prop-2-enylidene]-1-phenylpyrazolidine-3,5-dione
    SMILES
    C1=CC=C(C=C1)N2C(=O)C(=CC=CC3=CC=CC=C3Cl)C(=O)N2
    InChIKey
    VVZJFICTTKPNCK-KVDBUQHUSA-N
    InChI
    1S/C18H13ClN2O2/c19-16-12-5-4-7-13(16)8-6-11-15-17(22)20-21(18(15)23)14-9-2-1-3-10-14/h1-12H,(H,20,22)/b8-6+,15-11+
    Synonyms
    4-[3-(2-Chlorophenyl)-2-propen-1-ylidene]-1-phenyl-3,5-pyrazolidinedione
  9. CTPB
    CAS: 586976-24-1 Formula: C31H43ClF3NO2 Molecular Weight: 554.13
    ● In Stock — US warehouse, ships to EU* Item #: C275156
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    IUPAC Name
    N-[4-chloro-3-(trifluoromethyl)phenyl]-2-ethoxy-6-pentadecylbenzamide
    SMILES
    CCCCCCCCCCCCCCCC1=C(C(=CC=C1)OCC)C(=O)NC2=CC(=C(C=C2)Cl)C(F)(F)F
    InChIKey
    OYBMVMAXKOGYDC-UHFFFAOYSA-N
    InChI
    1S/C31H43ClF3NO2/c1-3-5-6-7-8-9-10-11-12-13-14-15-16-18-24-19-17-20-28(38-4-2)29(24)30(37)36-25-21-22-27(32)26(23-25)31(33,34)35/h17,19-23H,3-16,18H2,show more
    Synonyms
    n-(4-chloro-3-trifluoromethyl-phenyl)-2-ethoxy-6-pentadecyl-benzamide
  10. CTPI-2
    CAS: 68003-38-3 Formula: C13H9ClN2O6S Molecular Weight: 356.74
    ● In Stock — US warehouse, ships to EU* Item #: C412834
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    IUPAC Name
    2-[(4-chloro-3-nitrophenyl)sulfonylamino]benzoic acid
    SMILES
    C1=CC=C(C(=C1)C(=O)O)NS(=O)(=O)C2=CC(=C(C=C2)Cl)[N+](=O)[O-]
    InChIKey
    NJTHPOSQGFJTDP-UHFFFAOYSA-N
    InChI
    1S/C13H9ClN2O6S/c14-10-6-5-8(7-12(10)16(19)20)23(21,22)15-11-4-2-1-3-9(11)13(17)18/h1-7,15H,(H,17,18)
    Synonyms
    Z45511835 | Benzoic acid, 2-[[(4-chloro-3-nitrophenyl)sulfonyl]amino]- | 2-[(4-chloro-3-nitrophenyl)sulfonylamino]ben...
  11. CTS-1027, Matrix metalloproteinase-2 inhibitor
    CAS: 193022-04-7 Formula: C19H20ClNO6S Molecular Weight: 425.88
    Solid ≥99%
    ◐ .Made to order · 8–12 wks Item #: C125402
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    IUPAC Name
    4-[[4-(4-chlorophenoxy)phenyl]sulfonylmethyl]-N-hydroxyoxane-4-carboxamide
    SMILES
    C1COCCC1(CS(=O)(=O)C2=CC=C(C=C2)OC3=CC=C(C=C3)Cl)C(=O)NO
    InChIKey
    ROSNVSQTEGHUKU-UHFFFAOYSA-N
    InChI
    1S/C19H20ClNO6S/c20-14-1-3-15(4-2-14)27-16-5-7-17(8-6-16)28(24,25)13-19(18(22)21-23)9-11-26-12-10-19/h1-8,23H,9-13H2,(H,21,22)
    Synonyms
    4-(4-(4-Chloro-phenoxy)-benzenesulfonylmethyl)-tetrahydro-pyran-4-carboxylic acid hydroxyamide | 830c | BDBM11863 | 4...
  12. CTx0294885
    CAS: 1439934-41-4 Formula: C22H24ClN7O Molecular Weight: 437.93
    ● In Stock — US warehouse, ships to EU* Item #: C302882
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    IUPAC Name
    2-[[5-chloro-2-(4-piperazin-1-ylanilino)pyrimidin-4-yl]amino]-N-methylbenzamide
    SMILES
    CNC(=O)C1=CC=CC=C1NC2=NC(=NC=C2Cl)NC3=CC=C(C=C3)N4CCNCC4
    InChIKey
    FCLOIQHNUARDSR-UHFFFAOYSA-N
    InChI
    1S/C22H24ClN7O/c1-24-21(31)17-4-2-3-5-19(17)28-20-18(23)14-26-22(29-20)27-15-6-8-16(9-7-15)30-12-10-25-11-13-30/h2-9,14,25H,10-13H2,1H3,(H,24,31)(H2,2show more
    Synonyms
    (Z)-2-((E)-(5-chloro-2-((4-(piperazin-1-yl)phenyl)amino)pyrimidin-4(3H)-ylidene)amino)-N-methylbenzimidic acid
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Frequently Asked Questions

What does the By Target/Pathway/Disease listing cover?
It groups compounds associated with targets in By Target/Pathway/Disease, organised so you can move from the pathway to an individual target and then to a specific chemotype. Each entry carries structure, CAS number, and reported activity.
How is By Target/Pathway/Disease organised?
By Target/Pathway/Disease is broken down into Compound Libraries, PROTACs, molecular glues and other degraders and Antibody-drug Conjugates(ADC). Compounds acting on more than one node appear under each relevant target.
How do I choose compounds for By Target/Pathway/Disease research?
For By Target/Pathway/Disease, pick a well-characterised reference compound for the node you want to perturb, and pair it with a structurally unrelated compound hitting the same target — that is the cleanest way to separate pathway effects from off-target ones. Check potency, selectivity, and cell permeability against your assay format. All products are supplied for professional research and development use only, and are not for use in humans, animals, diagnostics, or therapy.
How do I find a specific compound within By Target/Pathway/Disease?
Search By Target/Pathway/Disease by compound name, CAS number, or SMILES, or drill down through the target listing. Unlisted compounds and bulk quantities: [email protected]. We supply verified businesses, research institutions, universities, and government agencies.

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