By Target / Pathway / Disease

Explore small molecules, screening libraries, and tool compounds for discovery research. Browse by target, pathway, or ligand family to quickly find inhibitors, agonists, and chemical probes, with searchable structure/CAS data and supporting documents (SDS/COA where available).

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Ready-to-screen compound libraries and focused sets for hit discovery. Browse libraries by target class, pathway, scaffold, or application, and review size, format, and compound information to build screening panels.Customize Your Screening Library to choose compounds, format, and volume, and we’ll prepare a ready-to-use set for you.Customize Your Screening Library

Navigate small molecules by ligand family or scaffold to build focused sets and explore structure–activity relationships. This category groups related chemotypes, helping you select analogs, fragments, and tool molecules for discovery research.

ADC-focused building blocks and tools to support antibody–drug conjugate research. Explore payloads, linkers, conjugation reagents, and related small-molecule components (where available) for designing and evaluating ADC constructs.

PROTAC

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PROTAC and targeted protein degradation tools for discovery research. Browse degrader-related ligands, linkers, and building blocks (where available) to assemble or screen PROTAC designs, with clear identifiers for efficient selection.

Explore pathway-focused tool compounds to study and modulate key signaling cascades. Browse small molecules grouped by signaling pathway to support mechanism studies, phenotypic assays, and target validation, with clear identifiers for fast searching.

Find bioactive small molecules organized by protein target (DTO). Quickly locate tool compounds for specific targets and compare identifiers such as structure, CAS, and synonyms—plus supporting documents —to build screening and validation sets.

Shop small molecules and tool compounds organized by disease area (DOID). Discover chemical probes, libraries, and related products mapped to therapeutic areas to help assemble compound sets for screening, pathway exploration, and model studies.

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  1. L-838417-d9
    CAS: 1213669-91-0 Formula: C19H19F2N7O Molecular Weight: 408.45
    ● In Stock — US warehouse, ships to EU* Item #: C412169
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    IUPAC Name
    3-(2,5-difluorophenyl)-7-[1,1,1,3,3,3-hexadeuterio-2-(trideuteriomethyl)propan-2-yl]-6-[(2-methyl-1,2,4-triazol-3-yl)methoxy]-[1,2,4]triazolo[4,3-b]pyshow more
    SMILES
    CC(C)(C)C1=CC2=NN=C(N2N=C1OCC3=NC=NN3C)C4=C(C=CC(=C4)F)F
    InChIKey
    BQDUNOMMYOKHEP-GQALSZNTSA-N
    InChI
    1S/C19H19F2N7O/c1-19(2,3)13-8-15-24-25-17(12-7-11(20)5-6-14(12)21)28(15)26-18(13)29-9-16-22-10-23-27(16)4/h5-8,10H,9H2,1-4H3/i1D3,2D3,3D3
    Synonyms
    AKOS040745027 | HY-15831 | 3-(2,5-Difluorophenyl)-7-(1,1-di(methyl-d3)ethyl-2,2,2-d3)-6-((1-methyl-1H-1,2,4-triazol-5...
  2. CYM 5442 hydrochloride
    CAS: 1783987-80-3 PubChem CID: 90488865 Formula: C23H28ClN3O4 Molecular Weight: 445.94
    ● In Stock — US warehouse, ships to EU* Item #: C288038
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    IUPAC Name
    2-[[4-[5-(3,4-diethoxyphenyl)-1,2,4-oxadiazol-3-yl]-2,3-dihydro-1H-inden-1-yl]amino]ethanol;hydrochloride
    SMILES
    CCOC1=C(C=C(C=C1)C2=NC(=NO2)C3=C4CCC(C4=CC=C3)NCCO)OCC.Cl
    InChIKey
    KMZLVDAVGXYZDA-UHFFFAOYSA-N
    InChI
    1S/C23H27N3O4.ClH/c1-3-28-20-11-8-15(14-21(20)29-4-2)23-25-22(26-30-23)18-7-5-6-17-16(18)9-10-19(17)24-12-13-27;/h5-8,11,14,19,24,27H,3-4,9-10,12-13H2show more
    Synonyms
    2-(4-(5-(3,4-Diethoxyphenyl)-1,2,4-oxadiazol-3-yl)-2,3-dihydro-1H-inden-1-yl amino) ethanol hydrochloride
  3. CP21R7 (CP21)
    CAS: 125314-13-8 Formula: C19H15N3O2 Molecular Weight: 317.34
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: C421058
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    IUPAC Name
    3-(3-aminophenyl)-4-(1-methylindol-3-yl)pyrrole-2,5-dione
    SMILES
    CN1C=C(C2=CC=CC=C21)C3=C(C(=O)NC3=O)C4=CC(=CC=C4)N
    InChIKey
    RGTAEYDIDMGJLX-UHFFFAOYSA-N
    InChI
    1S/C19H15N3O2/c1-22-10-14(13-7-2-3-8-15(13)22)17-16(18(23)21-19(17)24)11-5-4-6-12(20)9-11/h2-10H,20H2,1H3,(H,21,23,24)
    Synonyms
    1H-​Pyrrole-​2,​5-​dione,3-​(3-​aminophenyl)​-​4-​(1-​methyl-​1H-​indol-​3-​yl)​-
  4. CP21R7 (CP21)
    CAS: 125314-13-8 Formula: C19H15N3O2 Molecular Weight: 317.34
    ● In Stock — US warehouse, ships to EU* Item #: C413888
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    IUPAC Name
    3-(3-aminophenyl)-4-(1-methylindol-3-yl)pyrrole-2,5-dione
    SMILES
    CN1C=C(C2=CC=CC=C21)C3=C(C(=O)NC3=O)C4=CC(=CC=C4)N
    InChIKey
    RGTAEYDIDMGJLX-UHFFFAOYSA-N
    InChI
    1S/C19H15N3O2/c1-22-10-14(13-7-2-3-8-15(13)22)17-16(18(23)21-19(17)24)11-5-4-6-12(20)9-11/h2-10H,20H2,1H3,(H,21,23,24)
    Synonyms
    3-(3-Aminophenyl)-4-(1-methyl-1H-indol-3-yl)pyrrole-2,5-dione | CP21
  5. CPI-1189
    CAS: 183619-38-7 Formula: C13H18N2O2 Molecular Weight: 234.29
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: C422253
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    IUPAC Name
    4-acetamido-N-tert-butylbenzamide
    SMILES
    CC(=O)NC1=CC=C(C=C1)C(=O)NC(C)(C)C
    InChIKey
    DJKNRCWSXSZACF-UHFFFAOYSA-N
    InChI
    1S/C13H18N2O2/c1-9(16)14-11-7-5-10(6-8-11)12(17)15-13(2,3)4/h5-8H,1-4H3,(H,14,16)(H,15,17)
    Synonyms
    3-(Methylmercapto)propan-1-ol | REN-1654 | Cpi 1189 | Q27272645 | BS-42420 | CPI1189 | CPI-1189 | AS-35332 | MFCD0077...
  6. CPI-169
    CAS: 1450655-76-1 Formula: C27H36N4O5S Molecular Weight: 528.66
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: C421665
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    IUPAC Name
    1-[1-(1-ethylsulfonylpiperidin-4-yl)ethyl]-N-[(4-methoxy-6-methyl-2-oxo-1H-pyridin-3-yl)methyl]-2-methylindole-3-carboxamide
    SMILES
    CCS(=O)(=O)N1CCC(CC1)C(C)N2C(=C(C3=CC=CC=C32)C(=O)NCC4=C(C=C(NC4=O)C)OC)C
    InChIKey
    LHGUZCKPFXXVPV-UHFFFAOYSA-N
    InChI
    1S/C27H36N4O5S/c1-6-37(34,35)30-13-11-20(12-14-30)18(3)31-19(4)25(21-9-7-8-10-23(21)31)27(33)28-16-22-24(36-5)15-17(2)29-26(22)32/h7-10,15,18,20H,6,11show more
    Synonyms
    1-[1-(1-ethylsulfonylpiperidin-4-yl)ethyl]-N-[(4-methoxy-6-methyl-2-oxo-1H-pyridin-3-yl)methyl]-2-methylindole-3-carb...
  7. CPI-169
    CAS: 1450655-76-1 Formula: C27H36N4O5S Molecular Weight: 528.66
    ● In Stock — US warehouse, ships to EU* Item #: C275483
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    Technical Identifiers
    IUPAC Name
    1-[1-(1-ethylsulfonylpiperidin-4-yl)ethyl]-N-[(4-methoxy-6-methyl-2-oxo-1H-pyridin-3-yl)methyl]-2-methylindole-3-carboxamide
    SMILES
    CCS(=O)(=O)N1CCC(CC1)C(C)N2C(=C(C3=CC=CC=C32)C(=O)NCC4=C(C=C(NC4=O)C)OC)C
    InChIKey
    LHGUZCKPFXXVPV-UHFFFAOYSA-N
    InChI
    1S/C27H36N4O5S/c1-6-37(34,35)30-13-11-20(12-14-30)18(3)31-19(4)25(21-9-7-8-10-23(21)31)27(33)28-16-22-24(36-5)15-17(2)29-26(22)32/h7-10,15,18,20H,6,11show more
    Synonyms
    1-[1-(1-ethylsulfonylpiperidin-4-yl)ethyl]-N-[(4-methoxy-6-methyl-2-oxo-1H-pyridin-3-yl)methyl]-2-methylindole-3-carb...
  8. CPI-360
    CAS: 1802175-06-9 Formula: C25H31N3O4 Molecular Weight: 437.53
    ● In Stock — US warehouse, ships to EU* Item #: C413806
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    IUPAC Name
    N-[(4-methoxy-6-methyl-2-oxo-1H-pyridin-3-yl)methyl]-2-methyl-1-[(1R)-1-(oxan-4-yl)ethyl]indole-3-carboxamide
    SMILES
    CC1=CC(=C(C(=O)N1)CNC(=O)C2=C(N(C3=CC=CC=C32)C(C)C4CCOCC4)C)OC
    InChIKey
    PFPSFENQCNMITC-MRXNPFEDSA-N
    InChI
    1S/C25H31N3O4/c1-15-13-22(31-4)20(24(29)27-15)14-26-25(30)23-17(3)28(21-8-6-5-7-19(21)23)16(2)18-9-11-32-12-10-18/h5-8,13,16,18H,9-12,14H2,1-4H3,(H,26show more
    Synonyms
    (R)-N-((4-methoxy-6-methyl-2-oxo-1,2-dihydropyridin-3-yl)methyl)-2-methyl-1-(1-(tetrahydro-2H-pyran-4-yl)ethyl)-1H-in...
  9. CPI-360
    CAS: 1802175-06-9 Formula: C25H31N3O4 Molecular Weight: 437.53
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: C422206
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    Technical Identifiers
    IUPAC Name
    N-[(4-methoxy-6-methyl-2-oxo-1H-pyridin-3-yl)methyl]-2-methyl-1-[(1R)-1-(oxan-4-yl)ethyl]indole-3-carboxamide
    SMILES
    CC1=CC(=C(C(=O)N1)CNC(=O)C2=C(N(C3=CC=CC=C32)C(C)C4CCOCC4)C)OC
    InChIKey
    PFPSFENQCNMITC-MRXNPFEDSA-N
    InChI
    1S/C25H31N3O4/c1-15-13-22(31-4)20(24(29)27-15)14-26-25(30)23-17(3)28(21-8-6-5-7-19(21)23)16(2)18-9-11-32-12-10-18/h5-8,13,16,18H,9-12,14H2,1-4H3,(H,26show more
    Synonyms
    (R)-N-((4-methoxy-6-methyl-2-oxo-1,2-dihydropyridin-3-yl)methyl)-2-methyl-1-(1-(tetrahydro-2H-pyran-4-yl)ethyl)-1H-in...
  10. CVT-11127(GS-456332)
    CAS: 1018674-83-3 Formula: C25H23Cl2N5O3 Molecular Weight: 512.39
    Solid Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. ≥99%
    ◐ .Made to order · 8–12 wks Item #: C413122
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    IUPAC Name
    N-[2-[6-[(3,4-dichlorophenyl)methylamino]-2-(4-methoxyphenyl)-3-oxopyrido[2,3-b]pyrazin-4-yl]ethyl]acetamide
    SMILES
    CC(=O)NCCN1C2=C(C=CC(=N2)NCC3=CC(=C(C=C3)Cl)Cl)N=C(C1=O)C4=CC=C(C=C4)OC
    InChIKey
    PVTIQVJHZDSETN-UHFFFAOYSA-N
    InChI
    1S/C25H23Cl2N5O3/c1-15(33)28-11-12-32-24-21(30-23(25(32)34)17-4-6-18(35-2)7-5-17)9-10-22(31-24)29-14-16-3-8-19(26)20(27)13-16/h3-10,13H,11-12,14H2,1-2show more
    Synonyms
    FMK13918Acetamide,N-​[2-​[6-​[[(3,​4-​dichlorophenyl)​methyl]​amino]​-​2-​(4-​methoxyphenyl)​-​3-​oxopyrido[2,​3-​b]​...
  11. CRT0066101 dihydrochloride
    CAS: 1883545-60-5 PubChem CID: 136664697 Formula: C18H22N6O.2HCl Molecular Weight: 411.33
    ● In Stock — US warehouse, ships to EU* Item #: C275429
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    IUPAC Name
    2-[4-[[(2R)-2-aminobutyl]amino]pyrimidin-2-yl]-4-(1-methylpyrazol-4-yl)phenol;dihydrochloride
    SMILES
    CCC(CNC1=NC(=NC=C1)C2=C(C=CC(=C2)C3=CN(N=C3)C)O)N.Cl.Cl
    InChIKey
    CXYCRYGNFKDPRH-FMOMHUKBSA-N
    InChI
    1S/C18H22N6O.2ClH/c1-3-14(19)10-21-17-6-7-20-18(23-17)15-8-12(4-5-16(15)25)13-9-22-24(2)11-13;;/h4-9,11,14,25H,3,10,19H2,1-2H3,(H,20,21,23);2*1H/t14-;show more
    Synonyms
    CRT0066101 2HCl | 2-[4-[[(2R)-2-Aminobutyl]amino]pyrimidin-2-yl]-4-(1-methyl-1H-pyrazol-4-yl)phenoldihydrochloride
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Frequently Asked Questions

What does the By Target/Pathway/Disease listing cover?
It groups compounds associated with targets in By Target/Pathway/Disease, organised so you can move from the pathway to an individual target and then to a specific chemotype. Each entry carries structure, CAS number, and reported activity.
How is By Target/Pathway/Disease organised?
By Target/Pathway/Disease is broken down into Compound Libraries, PROTACs, molecular glues and other degraders and Antibody-drug Conjugates(ADC). Compounds acting on more than one node appear under each relevant target.
How do I choose compounds for By Target/Pathway/Disease research?
For By Target/Pathway/Disease, pick a well-characterised reference compound for the node you want to perturb, and pair it with a structurally unrelated compound hitting the same target — that is the cleanest way to separate pathway effects from off-target ones. Check potency, selectivity, and cell permeability against your assay format. All products are supplied for professional research and development use only, and are not for use in humans, animals, diagnostics, or therapy.
How do I find a specific compound within By Target/Pathway/Disease?
Search By Target/Pathway/Disease by compound name, CAS number, or SMILES, or drill down through the target listing. Unlisted compounds and bulk quantities: [email protected]. We supply verified businesses, research institutions, universities, and government agencies.

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