5'-dGMP - Moligand™ , CAS No.902-04-5

CAS: 902-04-5 Cat. No.: D607215 EC Number: 212-988-2

GRADE & PURITY Moligand™

Synonyms

2'-Deoxyguanosine-5'-Monophosphate | 7EAM4TG712 | PD006198 | 2'-deoxyguanosine-5'-phosphate | 2'-Deoxyguanylic acid | Deoxy-GMP | SR-01000884012-1 | Deoxyguanosine 5'-phosphate | deoxyguanosine-phosphate | Guanosine, 2'-deoxy-, 5'-(dihydrogen phosphate) (

Storage

Room temperature

Specifications

Synonyms

2'-Deoxyguanosine-5'-Monophosphate | 7EAM4TG712 | PD006198 | 2'-deoxyguanosine-5'-phosphate | 2'-Deoxyguanylic acid | Deoxy-GMP | SR-01000884012-1 | Deoxyguanosine 5'-phosphate | deoxyguanosine-phosphate | Guanosine, 2'-deoxy-, 5'-(dihydrogen phosphate) (

Specifications & Purity

Moligand™

Storage

Room temperature

Grade

Moligand™

Names and Identifiers

• Canonical Smiles: C1C(C(OC1N2C=NC3=C2N=C(NC3=O)N)COP(=O)(O)O)O
• IUPAC Name: [(2R,3S,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methyl dihydrogen phosphate
• InChIKey: LTFMZDNNPPEQNG-KVQBGUIXSA-N
• INCHI: 1S/C10H14N5O7P/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(22-6)2-21-23(18,19)20/h3-6,16H,1-2H2,(H2,18,19,20)(H3,11,13,14,17)/t4-,5+,6+/m0/s1
• Isomeric SMILES: C1[C@@H]([C@H](O[C@H]1N2C=NC3=C2N=C(NC3=O)N)COP(=O)(O)O)O
• Alternate CAS: 902-04-5,33430-61-4 (di-hydrochloride salt)
• MeSH Entry Terms: 2'-deoxyguanosine 5'-monophosphate;2'-deoxyguanosine 5'-phosphate;2'-deoxyguanosine 5'-phosphate, disodium salt;2'-deoxyguanosine 5'-phosphate, ion (1+);2'-dG-5'-MP;deoxyguanosine 5'-monophosphate;dGMP
• Reaxy-Rn: 58430
• Reaxys-RN_link_address: https://www.reaxys.com/reaxys/secured/hopinto.do?context=S&query=IDE.XRN=58430&ln=

Taxonomic Classification

Taxonomy Tree

• Kingdom Organic compounds
  • Superclass Nucleosides, nucleotides, and analogues
    • Class Purine nucleotides
      • Subclass Purine deoxyribonucleotides
        • Level5 Purine deoxyribonucleoside monophosphates
          • Level6 Purine 2'-deoxyribonucleoside monophosphates

• Kingdom: Organic compounds
• Superclass: Nucleosides, nucleotides, and analogues
• Class: Purine nucleotides
• Subclass: Purine deoxyribonucleotides
• Intermediate Tree Nodes: Purine deoxyribonucleoside monophosphates
• Direct Parent: Purine 2'-deoxyribonucleoside monophosphates
• Alternative Parents: Purines and purine derivatives Monoalkyl phosphates Hydroxypyrimidines N-substituted imidazoles Tetrahydrofurans Heteroaromatic compounds Secondary alcohols Oxacyclic compounds Azacyclic compounds Organopnictogen compounds Organonitrogen compounds Organic oxides Hydrocarbon derivatives
• Molecular Framework: Aromatic heteropolycyclic compounds
• Substituents: Purine 2'-deoxyribonucleoside monophosphate - Imidazopyrimidine - Purine - Hydroxypyrimidine - Monoalkyl phosphate - N-substituted imidazole - Organic phosphoric acid derivative - Phosphoric acid ester - Alkyl phosphate - Pyrimidine - Azole - Imidazole - Heteroaromatic compound - Tetrahydrofuran - Secondary alcohol - Organoheterocyclic compound - Azacycle - Oxacycle - Organooxygen compound - Organonitrogen compound - Hydrocarbon derivative - Organic oxide - Organopnictogen compound - Organic oxygen compound - Organic nitrogen compound - Alcohol - Aromatic heteropolycyclic compound
• Description: This compound belongs to the class of organic compounds known as purine 2'-deoxyribonucleoside monophosphates. These are purine nucleotides with monophosphate group linked to the ribose moiety lacking a hydroxyl group at position 2.
• External Descriptors: Deoxyribonucleotides

Data sources

1. Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS. ClassyFire: Automated Chemical Classification With A Comprehensive, Computable Taxonomy. Journal of Cheminformatics, 2016, 8:61.

DOI: 10.1186/s13321-016-0174-y

Mechanisms of Action

Chemical and Physical Properties

• Molecular Weight: 347.220 g/mol
• XLogP3: -3.000
• Hydrogen Bond Donor Count: 5
• Hydrogen Bond Acceptor Count: 9
• Rotatable Bond Count: 4
• Exact Mass: 347.063 Da
• Monoisotopic Mass: 347.063 Da
• Topological Polar Surface Area: 182.000 Ų
• Heavy Atom Count: 23
• Formal Charge: 0
• Complexity: 568.000
• Isotope Atom Count: 0
• Defined Atom Stereocenter Count: 3
• Undefined Atom Stereocenter Count: 0
• Defined Bond Stereocenter Count: 0
• Undefined Bond Stereocenter Count: 0
• The total count of all stereochemical bonds: 0
• Covalently-Bonded Unit Count: 1

References

1. Xu Shichao, Wu Haifeng, Liu Siyuan, Du Peidong, Wang Hui, Yang Haijun, Xu Wenjie, Chen Shuangming, Song Li, Li Jikun, Shi Xinghua, Wang Zhen-Gang.  (2023)  A supramolecular metalloenzyme possessing robust oxidase-mimetic catalytic function.  Nature Communications,  14  (1): (1-14).  [PMID:37419896] [10.1038/s41467-023-39779-6]

2. Yating Li, Jason Tan, Yanqin Tu, Jingnan Wu, Zaifang Zhang, Yifeng Wei, Xinan Jiao, Yan Zhou.  (2025)  Distinct Phage-Encoded Enzymes for Substitution of Deoxythymidine by Deoxyuridine in Phage Genomes.  Advanced Science,      [PMID:41001765] [10.1002/advs.202512937]

3. Zhongnan Huang, Qinhui Lin, Yaling Chen, Yuxing Lei, Zhenglian Li, Yunzhong Xu, Wei Chen, Huaping Peng.  (2025)  Rational Design of Nonmetal Material Self-Mediated Electron Transfer-Based Electrochemiluminescence Sensing Platform and Its Application.  ANALYTICAL CHEMISTRY,      [PMID:41233168] [10.1021/acs.analchem.5c05612]