By Target / Pathway / Disease

Explore small molecules, screening libraries, and tool compounds for discovery research. Browse by target, pathway, or ligand family to quickly find inhibitors, agonists, and chemical probes, with searchable structure/CAS data and supporting documents (SDS/COA where available).

136,942 products

Ready-to-screen compound libraries and focused sets for hit discovery. Browse libraries by target class, pathway, scaffold, or application, and review size, format, and compound information to build screening panels.Customize Your Screening Library to choose compounds, format, and volume, and we’ll prepare a ready-to-use set for you.Customize Your Screening Library

Navigate small molecules by ligand family or scaffold to build focused sets and explore structure–activity relationships. This category groups related chemotypes, helping you select analogs, fragments, and tool molecules for discovery research.

ADC-focused building blocks and tools to support antibody–drug conjugate research. Explore payloads, linkers, conjugation reagents, and related small-molecule components (where available) for designing and evaluating ADC constructs.

PROTAC

2,814

PROTAC and targeted protein degradation tools for discovery research. Browse degrader-related ligands, linkers, and building blocks (where available) to assemble or screen PROTAC designs, with clear identifiers for efficient selection.

Explore pathway-focused tool compounds to study and modulate key signaling cascades. Browse small molecules grouped by signaling pathway to support mechanism studies, phenotypic assays, and target validation, with clear identifiers for fast searching.

Find bioactive small molecules organized by protein target (DTO). Quickly locate tool compounds for specific targets and compare identifiers such as structure, CAS, and synonyms—plus supporting documents —to build screening and validation sets.

Shop small molecules and tool compounds organized by disease area (DOID). Discover chemical probes, libraries, and related products mapped to therapeutic areas to help assemble compound sets for screening, pathway exploration, and model studies.

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  1. Mestranol, Estrogen receptor alpha agonist
    CAS: 72-33-3 EC Number: 200-777-8 Formula: C21H26O2 Molecular Weight: 310.43
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. 10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: M409226
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    Synonyms
    (17α)​-3-​methoxy-19-​norpregna-​1,​3,​5(10)​-​trien-​20-​yn-​17-​ol
  2. Mequitazine, Histamine H1 receptor antagonist
    CAS: 29216-28-2 EC Number: 249-521-7 Formula: C20H22N2S Molecular Weight: 322.47
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: M423030
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    IUPAC Name
    10-(1-azabicyclo[2.2.2]octan-3-ylmethyl)phenothiazine
    SMILES
    C1CN2CCC1C(C2)CN3C4=CC=CC=C4SC5=CC=CC=C53
    InChIKey
    HOKDBMAJZXIPGC-UHFFFAOYSA-N
    InChI
    1S/C20H22N2S/c1-3-7-19-17(5-1)22(18-6-2-4-8-20(18)23-19)14-16-13-21-11-9-15(16)10-12-21/h1-8,15-16H,9-14H2
    Synonyms
    Metaplexan | Phenothiazine, 10-(3-quinuclidinylmethyl)- | 10-(quinuclidin-3-ylmethyl)phenothiazine;Mequitazine | BDBM...
  3. Merbarone
    CAS: 97534-21-9 Formula: C11H9N3O3S Molecular Weight: 263.27
    Solid ≥98%
    ● In Stock — US warehouse, ships to EU* Item #: M345212
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    Technical Identifiers
    IUPAC Name
    4,6-dioxo-N-phenyl-2-sulfanylidene-1,3-diazinane-5-carboxamide
    SMILES
    C1=CC=C(C=C1)NC(=O)C2C(=O)NC(=S)NC2=O
    InChIKey
    JARCFMKMOFFIGZ-UHFFFAOYSA-N
    InChI
    1S/C11H9N3O3S/c15-8(12-6-4-2-1-3-5-6)7-9(16)13-11(18)14-10(7)17/h1-5,7H,(H,12,15)(H2,13,14,16,17,18)
    Synonyms
    MS-23710 | NCGC00165827-01 | CCRIS 8215 | FT-0630995 | UNII-YWB9IF596V | BDBM241949 | 4,6-dioxo-N-phenyl-2-thioxohexa...
  4. Mercaptopurine (6-MP)
    CAS: 50-44-2 EC Number: 200-037-4 Formula: C5H4N4S Molecular Weight: 152.18
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. 10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: M409022
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    Synonyms
    3H-purine-6(7H)-thione
  5. Meso-1,2,3,4-Tetrachlorobutane
    CAS: 28507-96-2 EC Number: 249-059-6 Formula: C4H6Cl4 Molecular Weight: 195.90
    Solid ≥98%
    ◐ .Made to order · 8–12 wks Item #: M303326
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    Technical Identifiers
    IUPAC Name
    (2S,3R)-1,2,3,4-tetrachlorobutane
    SMILES
    C(C(C(CCl)Cl)Cl)Cl
    InChIKey
    IXZVKECRTHXEEW-ZXZARUISSA-N
    InChI
    1S/C4H6Cl4/c5-1-3(7)4(8)2-6/h3-4H,1-2H2/t3-,4+
    Synonyms
    AS-65617 | Butane, 1,2,3,4-tetrachloro-, (2R,3S)-rel- | SCHEMBL2468752 | (2S,3R)-1,2,3,4-Tetrachlorobutane | AKOS0062...
  6. Metadoxine
    CAS: 74536-44-0 Formula: C13H18N2O6 Molecular Weight: 298.3
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: M425802
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    IUPAC Name
    4,5-bis(hydroxymethyl)-2-methylpyridin-3-ol;(2S)-5-oxopyrrolidine-2-carboxylic acid
    SMILES
    CC1=NC=C(C(=C1O)CO)CO.C1CC(=O)NC1C(=O)O
    InChIKey
    RYKKQQUKJJGFMN-HVDRVSQOSA-N
    InChI
    1S/C8H11NO3.C5H7NO3/c1-5-8(12)7(4-11)6(3-10)2-9-5;7-4-2-1-3(6-4)5(8)9/h2,10-12H,3-4H2,1H3;3H,1-2H2,(H,6,7)(H,8,9)/t;3-/m.0/s1
    Synonyms
    CCG-267444 | PYRIDOXINE PYROGLUTAMATE | InChI=1/C11H13NO4/c1-12(7-10(13)14)11(15)16-8-9-5-3-2-4-6-9/h2-6H,7-8H2,1H3,(...
  7. Metarrestin (ML246)
    CAS: 1443414-10-5 Formula: C31H30N4O Molecular Weight: 474.6
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: M421627
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    IUPAC Name
    4-(7-benzyl-4-imino-5,6-diphenylpyrrolo[2,3-d]pyrimidin-3-yl)cyclohexan-1-ol
    SMILES
    C1CC(CCC1N2C=NC3=C(C2=N)C(=C(N3CC4=CC=CC=C4)C5=CC=CC=C5)C6=CC=CC=C6)O
    InChIKey
    WSMXAUJFLWRPNT-UHFFFAOYSA-N
    InChI
    1S/C31H30N4O/c32-30-28-27(23-12-6-2-7-13-23)29(24-14-8-3-9-15-24)34(20-22-10-4-1-5-11-22)31(28)33-21-35(30)25-16-18-26(36)19-17-25/h1-15,21,25-26,32,3show more
    Synonyms
    Metarrestin | AC-36411 | BDBM50606398 | trans-4-(7-benzyl-4-imino-5,6-diphenyl-4,7-dihydro-3h-pyrrolo[2,3-d]pyrimidin...
  8. Metarrestin (ML246)
    CAS: 1443414-10-5 Formula: C31H30N4O Molecular Weight: 474.6
    ● In Stock — US warehouse, ships to EU* Item #: M412966
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    Technical Identifiers
    IUPAC Name
    4-(7-benzyl-4-imino-5,6-diphenylpyrrolo[2,3-d]pyrimidin-3-yl)cyclohexan-1-ol
    SMILES
    C1CC(CCC1N2C=NC3=C(C2=N)C(=C(N3CC4=CC=CC=C4)C5=CC=CC=C5)C6=CC=CC=C6)O
    InChIKey
    WSMXAUJFLWRPNT-UHFFFAOYSA-N
    InChI
    1S/C31H30N4O/c32-30-28-27(23-12-6-2-7-13-23)29(24-14-8-3-9-15-24)34(20-22-10-4-1-5-11-22)31(28)33-21-35(30)25-16-18-26(36)19-17-25/h1-15,21,25-26,32,3show more
    Synonyms
    Metarrestin | AC-36411 | BDBM50606398 | trans-4-(7-benzyl-4-imino-5,6-diphenyl-4,7-dihydro-3h-pyrrolo[2,3-d]pyrimidin...
  9. Menbutone
    CAS: 3562-99-0 Formula: C15H14O4 Molecular Weight: 258.28
    ● In Stock — US warehouse, ships to EU* Item #: M413193
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    IUPAC Name
    4-(4-methoxynaphthalen-1-yl)-4-oxobutanoic acid
    SMILES
    COC1=CC=C(C2=CC=CC=C21)C(=O)CCC(=O)O
    InChIKey
    FHGJSJFIQNQBCK-UHFFFAOYSA-N
    InChI
    1S/C15H14O4/c1-19-14-8-6-11(13(16)7-9-15(17)18)10-4-2-3-5-12(10)14/h2-6,8H,7,9H2,1H3,(H,17,18)
    Synonyms
    Oprea1_763160 | HY-B1136 | Menbutone [INN:BAN] | UNII-341YM32546 | NCGC00160573-01 | SC 1749 [as sodium salt] | AMY15...
  10. Menin-MLL inhibitor 20
    CAS: 2448173-47-3 PubChem CID: 154988919 Formula: C33H40N8O4 Molecular Weight: 612.72
    ● In Stock — US warehouse, ships to EU* Item #: M401058
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    Technical Identifiers
    IUPAC Name
    tert-butyl N-[(3R)-1-[[2-[[4-(4-morpholin-4-yl-7H-pyrrolo[2,3-d]pyrimidin-6-yl)phenyl]carbamoyl]pyridin-4-yl]methyl]piperidin-3-yl]carbamate
    SMILES
    CC(C)(C)OC(=O)NC1CCCN(C1)CC2=CC(=NC=C2)C(=O)NC3=CC=C(C=C3)C4=CC5=C(N4)N=CN=C5N6CCOCC6
    InChIKey
    MPFHTFMFYAODPE-RUZDIDTESA-N
    InChI
    1S/C33H40N8O4/c1-33(2,3)45-32(43)38-25-5-4-12-40(20-25)19-22-10-11-34-28(17-22)31(42)37-24-8-6-23(7-9-24)27-18-26-29(39-27)35-21-36-30(26)41-13-15-44-show more
    Synonyms
    Menin-MLL inhibitor 20
  11. Metamizole sodium hydrate, Cyclooxygenase inhibitor
    CAS: 5907-38-0 Formula: C13H16N3NaO4S(free) Molecular Weight: 333.34(free)
    ● In Stock — US warehouse, ships to EU* Item #: M413103
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    IUPAC Name
    sodium;[(1,5-dimethyl-3-oxo-2-phenylpyrazol-4-yl)-methylamino]methanesulfonate;hydrate
    SMILES
    CC1=C(C(=O)N(N1C)C2=CC=CC=C2)N(C)CS(=O)(=O)[O-].O.[Na+]
    InChIKey
    UNZIDPIPYUMVPA-UHFFFAOYSA-M
    InChI
    1S/C13H17N3O4S.Na.H2O/c1-10-12(14(2)9-21(18,19)20)13(17)16(15(10)3)11-7-5-4-6-8-11;;/h4-8H,9H2,1-3H3,(H,18,19,20);;1H2/q;+1;/p-1
    Synonyms
    AKOS005166879 | NSC-758445 | AKOS015918129 | AS-13510 | CCRIS 272 | Methanesulfonic acid, ((2,3-dihydro-1,5-dimethyl-...
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Frequently Asked Questions

What does the By Target/Pathway/Disease listing cover?
It groups compounds associated with targets in By Target/Pathway/Disease, organised so you can move from the pathway to an individual target and then to a specific chemotype. Each entry carries structure, CAS number, and reported activity.
How is By Target/Pathway/Disease organised?
By Target/Pathway/Disease is broken down into Compound Libraries, PROTACs, molecular glues and other degraders and Antibody-drug Conjugates(ADC). Compounds acting on more than one node appear under each relevant target.
How do I choose compounds for By Target/Pathway/Disease research?
For By Target/Pathway/Disease, pick a well-characterised reference compound for the node you want to perturb, and pair it with a structurally unrelated compound hitting the same target — that is the cleanest way to separate pathway effects from off-target ones. Check potency, selectivity, and cell permeability against your assay format. All products are supplied for professional research and development use only, and are not for use in humans, animals, diagnostics, or therapy.
How do I find a specific compound within By Target/Pathway/Disease?
Search By Target/Pathway/Disease by compound name, CAS number, or SMILES, or drill down through the target listing. Unlisted compounds and bulk quantities: [email protected]. We supply verified businesses, research institutions, universities, and government agencies.

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