By Target / Pathway / Disease

Explore small molecules, screening libraries, and tool compounds for discovery research. Browse by target, pathway, or ligand family to quickly find inhibitors, agonists, and chemical probes, with searchable structure/CAS data and supporting documents (SDS/COA where available).

136,942 products

Ready-to-screen compound libraries and focused sets for hit discovery. Browse libraries by target class, pathway, scaffold, or application, and review size, format, and compound information to build screening panels.Customize Your Screening Library to choose compounds, format, and volume, and we’ll prepare a ready-to-use set for you.Customize Your Screening Library

Navigate small molecules by ligand family or scaffold to build focused sets and explore structure–activity relationships. This category groups related chemotypes, helping you select analogs, fragments, and tool molecules for discovery research.

ADC-focused building blocks and tools to support antibody–drug conjugate research. Explore payloads, linkers, conjugation reagents, and related small-molecule components (where available) for designing and evaluating ADC constructs.

PROTAC

2,814

PROTAC and targeted protein degradation tools for discovery research. Browse degrader-related ligands, linkers, and building blocks (where available) to assemble or screen PROTAC designs, with clear identifiers for efficient selection.

Explore pathway-focused tool compounds to study and modulate key signaling cascades. Browse small molecules grouped by signaling pathway to support mechanism studies, phenotypic assays, and target validation, with clear identifiers for fast searching.

Find bioactive small molecules organized by protein target (DTO). Quickly locate tool compounds for specific targets and compare identifiers such as structure, CAS, and synonyms—plus supporting documents —to build screening and validation sets.

Shop small molecules and tool compounds organized by disease area (DOID). Discover chemical probes, libraries, and related products mapped to therapeutic areas to help assemble compound sets for screening, pathway exploration, and model studies.

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  1. Methiothepin maleate
    CAS: 19728-88-2 PubChem CID: 5358812 Formula: C24H28N2O4S2 Molecular Weight: 472.62
    ◐ .Made to order · 8–12 wks Item #: M337895
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    IUPAC Name
    (Z)-but-2-enedioic acid;1-methyl-4-(3-methylsulfanyl-5,6-dihydrobenzo[b][1]benzothiepin-5-yl)piperazine
    SMILES
    CN1CCN(CC1)C2CC3=CC=CC=C3SC4=C2C=C(C=C4)SC.C(=CC(=O)O)C(=O)O
    InChIKey
    IWDBEHWZGDSFHR-BTJKTKAUSA-N
    InChI
    1S/C20H24N2S2.C4H4O4/c1-21-9-11-22(12-10-21)18-13-15-5-3-4-6-19(15)24-20-8-7-16(23-2)14-17(18)20;5-3(6)1-2-4(7)8/h3-8,14,18H,9-13H2,1-2H3;1-2H,(H,5,6)show more
    Synonyms
    CCG-39505 | DTXSID8042630 | HMS2096K11 | PIPERAZINE, 1-(10,11-DIHYDRO-8-(METHYLTHIO)DIBENZO(B,F)THIEPIN-10-YL)-4-METH...
  2. Methapyrilene HCl, Histamine H1 receptor antagonist
    CAS: 135-23-9 EC Number: 205-184-8 Formula: C14H20ClN3S Molecular Weight: 297.85
    Solid Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. ≥98%
    ● In Stock — US warehouse, ships to EU* Item #: M333078
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    IUPAC Name
    N,N-dimethyl-N'-pyridin-2-yl-N'-(thiophen-2-ylmethyl)ethane-1,2-diamine;hydrochloride
    SMILES
    CN(C)CCN(CC1=CC=CS1)C2=CC=CC=N2.Cl
    InChIKey
    BONORRGKLJBGRV-UHFFFAOYSA-N
    InChI
    1S/C14H19N3S.ClH/c1-16(2)9-10-17(12-13-6-5-11-18-13)14-7-3-4-8-15-14;/h3-8,11H,9-10,12H2,1-2H3;1H
    Synonyms
    2-((2-(Dimethylamino)ethyl)-2-thenyl-amino)pyridine hydrochloride | CAS-135-23-9 | EU-0100851 | Blue Line | DTXSID002...
  3. Methazolamide, Inhibitor of carbonic anhydrase 1;Inhibitor of carbonic anhydrase 12;Inhibitor of carbonic anhydrase 14;Inhibitor of carbonic anhydrase 4;Inhibitor of carbonic anhydrase 7
    CAS: 554-57-4 EC Number: 209-066-7 Formula: C5H8N4O3S2 Molecular Weight: 236.3
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. 10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: M408990
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    Synonyms
    CL 8490 | Acetamide, N-[5-(aminosulfonyl)-3-methyl-1,3,4-thiadiazol-2(3H)-ylidene]-
  4. Methenamine Hippurate, DNA inhibitor
    CAS: 5714-73-8 Formula: C15H21N5O3 Molecular Weight: 319.36
    ● In Stock — US warehouse, ships to EU* Item #: M414408
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    IUPAC Name
    2-benzamidoacetic acid;1,3,5,7-tetrazatricyclo[3.3.1.13,7]decane
    SMILES
    C1N2CN3CN1CN(C2)C3.C1=CC=C(C=C1)C(=O)NCC(=O)O
    InChIKey
    ROAIXOJGRFKICW-UHFFFAOYSA-N
    InChI
    1S/C9H9NO3.C6H12N4/c11-8(12)6-10-9(13)7-4-2-1-3-5-7;1-7-2-9-4-8(1)5-10(3-7)6-9/h1-5H,6H2,(H,10,13)(H,11,12);1-6H2
    Synonyms
    Viapta | Methenamine hippurate | D00855 | 2-benzamidoacetic acid;1,3,5,7-tetrazatricyclo[3.3.1.13,7]decane | FT-06710...
  5. Methenamine Hippurate, DNA inhibitor
    CAS: 5714-73-8 EC Number: 227-206-5 Formula: C15H21N5O3 Molecular Weight: 319.36
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: M424823
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    IUPAC Name
    2-benzamidoacetic acid;1,3,5,7-tetrazatricyclo[3.3.1.13,7]decane
    SMILES
    C1N2CN3CN1CN(C2)C3.C1=CC=C(C=C1)C(=O)NCC(=O)O
    InChIKey
    ROAIXOJGRFKICW-UHFFFAOYSA-N
    InChI
    1S/C9H9NO3.C6H12N4/c11-8(12)6-10-9(13)7-4-2-1-3-5-7;1-7-2-9-4-8(1)5-10(3-7)6-9/h1-5H,6H2,(H,10,13)(H,11,12);1-6H2
    Synonyms
    Viapta | Methenamine hippurate | D00855 | 2-benzamidoacetic acid;1,3,5,7-tetrazatricyclo[3.3.1.13,7]decane | FT-06710...
  6. Methacholine Chloride, Muscarinic acetylcholine receptor M3 agonist
    CAS: 62-51-1 EC Number: 200-537-2 Formula: C8H18ClNO2 Molecular Weight: 195.69
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: M425166
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    IUPAC Name
    2-acetyloxypropyl(trimethyl)azanium;chloride
    SMILES
    CC(C[N+](C)(C)C)OC(=O)C.[Cl-]
    InChIKey
    JHPHVAVFUYTVCL-UHFFFAOYSA-M
    InChI
    1S/C8H18NO2.ClH/c1-7(11-8(2)10)6-9(3,4)5;/h7H,6H2,1-5H3;1H/q+1;/p-1
    Synonyms
    Methacholine chloride|62-51-1|Acetyl-beta-methylcholine chloride|Provocholine|Mecholyl chloride|Methacholine (chlorid...
  7. Methotrexate-methyl-d3
    CAS: 432545-63-6 Formula: C20H19D3N8O5 Molecular Weight: 457.46
    ◐ .Made to order · 8–12 wks Item #: M336915
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    IUPAC Name
    (2S)-2-[[4-[(2,4-diaminopteridin-6-yl)methyl-(trideuteriomethyl)amino]benzoyl]amino]pentanedioic acid
    SMILES
    CN(CC1=CN=C2C(=N1)C(=NC(=N2)N)N)C3=CC=C(C=C3)C(=O)NC(CCC(=O)O)C(=O)O
    InChIKey
    FBOZXECLQNJBKD-FUPFOCIHSA-N
    InChI
    1S/C20H22N8O5/c1-28(9-11-8-23-17-15(24-11)16(21)26-20(22)27-17)12-4-2-10(3-5-12)18(31)25-13(19(32)33)6-7-14(29)30/h2-5,8,13H,6-7,9H2,1H3,(H,25,31)(H,2show more
    Synonyms
    Amethopterin-d3 | MTX-d3 | (4-(((2,4-diaminopteridin-6-yl)methyl)(methyl-d3)amino)benzoyl)-L-glutamic acid
  8. Methscopolamine, Muscarinic acetylcholine receptor M1 antagonist
    CAS: 155-41-9 EC Number: 205-844-5 PubChem CID: 5459110 Formula: C18H24BrNO4 Molecular Weight: 398.29
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: M408775
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    Synonyms
    (1α,​2β,​4β,​5α,​7β)​-7-​[(2S)​-​3-​hydroxy-​1-​oxo-​2-​phenylpropoxy]​-​9,​9-​dimethyl-3-​oxa-​9-​azoniatricyclo[3.3.1...
  9. Methyclothiazide, Thiazide-sensitive sodium-chloride cotransporter inhibitor
    CAS: 135-07-9 Formula: C9H11Cl2N3O4S2 Molecular Weight: 360.24
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. 10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: M408281
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    Synonyms
    2H-1,2,4-Benzothiadiazine-7-sulfonamide, 6-chloro-3-(chloromethyl)-3,4-dihydro-2-methyl-, 1,1-dioxide
  10. Methiothepin mesylate salt
    CAS: 74611-28-2 Formula: C21H28N2O3S3 Molecular Weight: 452.65
    Solid ≥98%
    ◐ .Made to order · 8–12 wks Item #: M335873
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    IUPAC Name
    methanesulfonic acid;1-methyl-4-(3-methylsulfanyl-5,6-dihydrobenzo[b][1]benzothiepin-5-yl)piperazine
    SMILES
    CN1CCN(CC1)C2CC3=CC=CC=C3SC4=C2C=C(C=C4)SC.CS(=O)(=O)O
    InChIKey
    CZMDZGZYKOGLJY-UHFFFAOYSA-N
    InChI
    1S/C20H24N2S2.CH4O3S/c1-21-9-11-22(12-10-21)18-13-15-5-3-4-6-19(15)24-20-8-7-16(23-2)14-17(18)20;1-5(2,3)4/h3-8,14,18H,9-13H2,1-2H3;1H3,(H,2,3,4)
    Synonyms
    AKOS026750379 | HMS2236E08 | ZCA61128 | Methiothepin mesylate salt | Methiothepinmesylate | Metitepine mesylate | M-1...
  11. Methoxamine hydrochloride, Adrenergic receptor alpha-1 agonist
    CAS: 61-16-5 EC Number: 200-499-7 Formula: C11H17NO3 · HCl Molecular Weight: 247.72
    10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: M425064
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    IUPAC Name
    2-amino-1-(2,5-dimethoxyphenyl)propan-1-ol;hydrochloride
    SMILES
    CC(C(C1=C(C=CC(=C1)OC)OC)O)N.Cl
    InChIKey
    YGRFXPCHZBRUKP-UHFFFAOYSA-N
    InChI
    1S/C11H17NO3.ClH/c1-7(12)11(13)9-6-8(14-2)4-5-10(9)15-3;/h4-7,11,13H,12H2,1-3H3;1H
    Synonyms
    METHOXAMINE HYDROCHLORIDE|61-16-5|Methoxamine HCl|2-amino-1-(2,5-dimethoxyphenyl)propan-1-ol hydrochloride|METHOXAMIN...
  12. Methoxsalen, Agonist of TAS2R20
    CAS: 298-81-7 EC Number: 206-066-9 Formula: C12H8O4 Molecular Weight: 216.19
    Moligand™ ? Moligand™ — Aladdin's line of ligands and bioactive small molecules. Use for receptor, pathway, and binding studies needing defined small-molecule tools. 10mM in DMSO
    ● In Stock — US warehouse, ships to EU* Item #: M408757
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    Synonyms
    Xanthotoxin, NCI-C55903 | 9-methoxy-7H-furo[3,2-g]chromen-7-one
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Frequently Asked Questions

What does the By Target/Pathway/Disease listing cover?
It groups compounds associated with targets in By Target/Pathway/Disease, organised so you can move from the pathway to an individual target and then to a specific chemotype. Each entry carries structure, CAS number, and reported activity.
How is By Target/Pathway/Disease organised?
By Target/Pathway/Disease is broken down into Compound Libraries, PROTACs, molecular glues and other degraders and Antibody-drug Conjugates(ADC). Compounds acting on more than one node appear under each relevant target.
How do I choose compounds for By Target/Pathway/Disease research?
For By Target/Pathway/Disease, pick a well-characterised reference compound for the node you want to perturb, and pair it with a structurally unrelated compound hitting the same target — that is the cleanest way to separate pathway effects from off-target ones. Check potency, selectivity, and cell permeability against your assay format. All products are supplied for professional research and development use only, and are not for use in humans, animals, diagnostics, or therapy.
How do I find a specific compound within By Target/Pathway/Disease?
Search By Target/Pathway/Disease by compound name, CAS number, or SMILES, or drill down through the target listing. Unlisted compounds and bulk quantities: [email protected]. We supply verified businesses, research institutions, universities, and government agencies.

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