≥99% for sensitive chromatographic and analytical workflows requiring minimal baseline interference.
Room temperature Ships Normal Check lot-specific COA for exact specifications.
SDS, COA, datasheet, and spec sheet available for download. Lot-specific COA accessible via lot number lookup.
Cited in 2 peer-reviewed publications across chromatography, organic synthesis, and cross-coupling reactions.
Product Application：
5-Methyl-2'-deoxycytidine in single-stranded DNA can act in cis to signal de novo DNA methylation.
| Pubchem Sid | 504758728 |
|---|---|
| Pubchem Sid Url | https://pubchem.ncbi.nlm.nih.gov/substance/504758728 |
| Canonical Smiles | CC1=CN(C(=O)N=C1N)C2CC(C(O2)CO)O |
| IUPAC Name | 4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidin-2-one |
| InChIKey | LUCHPKXVUGJYGU-XLPZGREQSA-N |
| INCHI | 1S/C10H15N3O4/c1-5-3-13(10(16)12-9(5)11)8-2-6(15)7(4-14)17-8/h3,6-8,14-15H,2,4H2,1H3,(H2,11,12,16)/t6-,7+,8+/m0/s1 |
| Isomeric SMILES | CC1=CN(C(=O)N=C1N)[C@H]2C[C@@H]([C@H](O2)CO)O |
| RTECS | HA3860000 |
| Molecular Weight | 241.24 |
| Beilstein | 25(3/4)3727 |
| Reaxy-Rn | 25651428 |
| Reaxys-RN_link_address | https://www.reaxys.com/reaxys/secured/hopinto.do?context=S&query=IDE.XRN=25651428&ln= |
Comprehensive hazard, handling, storage, and regulatory compliance document.
Download SDS →Lot-specific quality data. Enter your lot number to retrieve the exact COA.
Look up COA →Full quality attributes and acceptance criteria for this grade.
View spec sheet →Taxonomy Tree
| Kingdom | Organic compounds |
|---|---|
| Superclass | Nucleosides, nucleotides, and analogues |
| Class | Pyrimidine nucleosides |
| Subclass | Pyrimidine 2'-deoxyribonucleosides |
| Intermediate Tree Nodes | Not available |
| Direct Parent | Pyrimidine 2'-deoxyribonucleosides |
| Alternative Parents | Pyrimidones Aminopyrimidines and derivatives Imidolactams Hydropyrimidines Tetrahydrofurans Heteroaromatic compounds Secondary alcohols Oxacyclic compounds Azacyclic compounds Primary amines Primary alcohols Organopnictogen compounds Organic oxides Hydrocarbon derivatives |
| Molecular Framework | Aromatic heteromonocyclic compounds |
| Substituents | Pyrimidine 2'-deoxyribonucleoside - Aminopyrimidine - Pyrimidone - Hydropyrimidine - Pyrimidine - Imidolactam - Heteroaromatic compound - Tetrahydrofuran - Secondary alcohol - Azacycle - Oxacycle - Organoheterocyclic compound - Alcohol - Hydrocarbon derivative - Organic oxide - Organopnictogen compound - Primary amine - Primary alcohol - Organooxygen compound - Organonitrogen compound - Organic oxygen compound - Organic nitrogen compound - Amine - Aromatic heteromonocyclic compound |
| Description | This compound belongs to the class of organic compounds known as pyrimidine 2'-deoxyribonucleosides. These are compounds consisting of a pyrimidine linked to a ribose which lacks a hydroxyl group at position 2. |
| External Descriptors | 2'-deoxycytidine |
Find and download the COA for your product by matching the lot number on the packaging.
| Lot Number | Certificate Type | Date | Item |
|---|---|---|---|
 K1706008 | Certificate of Analysis | Jun 12, 2025 | D122897 |
| K1816199 | Certificate of Analysis | Sep 17, 2022 | D122897 |
| K1816198 | Certificate of Analysis | Sep 17, 2022 | D122897 |
| I1424075 | Certificate of Analysis | Jun 24, 2022 | D122897 |
| E1407010 | Certificate of Analysis | Mar 29, 2022 | D122897 |
| C2205297 | Certificate of Analysis | Jan 20, 2022 | D122897 |
| C2205299 | Certificate of Analysis | Jan 20, 2022 | D122897 |
| C2205307 | Certificate of Analysis | Jan 20, 2022 | D122897 |
| C2205308 | Certificate of Analysis | Jan 20, 2022 | D122897 |
| C2205422 | Certificate of Analysis | Jan 20, 2022 | D122897 |
| C2317440 | Certificate of Analysis | Jan 20, 2022 | D122897 |
| C2507137 | Certificate of Analysis | Jan 20, 2022 | D122897 |
| G2504114 | Certificate of Analysis | Jan 20, 2022 | D122897 |
| Solubility | Soluble in water. |
|---|---|
| Specific Rotation[α] | 44° (C=1.4,H2O) |
| Melt Point(°C) | 193°C |
| Molecular Weight | 241.240 g/mol |
| XLogP3 | -1.400 |
| Hydrogen Bond Donor Count | 3 |
| Hydrogen Bond Acceptor Count | 4 |
| Rotatable Bond Count | 2 |
| Exact Mass | 241.106 Da |
| Monoisotopic Mass | 241.106 Da |
| Topological Polar Surface Area | 108.000 Ų |
| Heavy Atom Count | 17 |
| Formal Charge | 0 |
| Complexity | 393.000 |
| Isotope Atom Count | 0 |
| Defined Atom Stereocenter Count | 3 |
| Undefined Atom Stereocenter Count | 0 |
| Defined Bond Stereocenter Count | 0 |
| Undefined Bond Stereocenter Count | 0 |
| The total count of all stereochemical bonds | 0 |
| Covalently-Bonded Unit Count | 1 |
| 1. Jing Yin, Feilong Zhu, Weiyu Hao, Qi Xu, Jin Chang, Huili Wang, Baoyuan Guo. (2017) Acylamino acid chiral fungicides on toxiciepigenetics in lambda DNA methylation. FOOD AND CHEMICAL TOXICOLOGY, [PMID:28456568] [10.1016/j.fct.2017.04.038] |
| 2. SunHongzheng , HanLongsen , GuoYueshuai , AnHuiqing , WangBing , ZhangXiangzheng , LiJiashuo , JiangYingtong , WangYue , SunGuangyi , ZhuShuai , TangShoubin , GeJuan , ChenMinjian , GuoXuejiang , WangQiang. (2024) The global phosphorylation landscape of mouse oocytes during meiotic maturation. EMBO JOURNAL, [PMID:39256562] [10.1038/s44318-024-00222-1] |
