5'-O-DMT-2'-O-TBDMS-Ac-rC - Suitable for molecular biology, ≥98% , CAS No.121058-85-3

CAS: 121058-85-3 Cat. No.: O650558 Molecular Weight: 701.89

GRADE & PURITY Suitable for molecular biology, ≥98%

Synonyms

SCHEMBL1582637 | N-(1-((2R,3R,4R,5R)-5-((Bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-3-((tert-butyldimethylsilyl)oxy)-4-hydroxytetrahydrofuran-2-yl)-2-oxo-1,2-dihydropyrimidin-4-yl)acetamide | N-(1-((2S,3S,4S,5S)-5-((bis(4-methoxyphenyl)(phenyl)methoxy)me

Storage

Store at 2-8°C,Protected from light,Argon charged

Shipped In

Wet ice

Overview

5'-O-DMT-2'-O-TBDMS-Ac-rC is a modified nucleoside and can be used to synthesize DNA or RNA.

Specifications

Synonyms

SCHEMBL1582637 | N-(1-((2R, 3R, 4R, 5R)-5-((Bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-3-((tert-butyldimethylsilyl)oxy)-4-hydroxytetrahydrofuran-2-yl)-2-oxo-1, 2-dihydropyrimidin-4-yl)acetamide | N-(1-((2S, 3S, 4S, 5S)-5-((bis(4-methoxyphenyl)(phenyl)methoxy)me

Specifications & Purity

Suitable for molecular biology, ≥98%

Biochemical and Physiological Mechanisms

5'-O-DMT-2'-O-TBDMS-Ac-rC is a modified nucleoside and can be used to synthesize DNA or RNA.

Stability And Storage

Store at -2-8 ℃ (24 months). Under Inert Atmosphere. Store in the dark.

Storage

Store at 2-8°C, Protected from light, Argon charged

Shipped In

Wet ice

This product requires cold chain shipping. Ground and other economy services are not available.

Grade

Suitable for molecular biology

Purity

≥98%

Names and Identifiers

• Canonical Smiles: CC(=O)NC1=NC(=O)N(C=C1)C2C(C(C(O2)COC(C3=CC=CC=C3)(C4=CC=C(C=C4)OC)C5=CC=C(C=C5)OC)O)O[Si](C)(C)C(C)(C)C
• IUPAC Name: N-[1-[(2R,3R,4R,5R)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-3-[tert-butyl(dimethyl)silyl]oxy-4-hydroxyoxolan-2-yl]-2-oxopyrimidin-4-yl]acetamide
• InChIKey: ZFRWPAYPCFTQHK-HYGOWAQNSA-N
• INCHI: 1S/C38H47N3O8Si/c1-25(42)39-32-22-23-41(36(44)40-32)35-34(49-50(7,8)37(2,3)4)33(43)31(48-35)24-47-38(26-12-10-9-11-13-26,27-14-18-29(45-5)19-15-27)28-16-20-30(46-6)21-17-28/h9-23,31,33-35,43H,24H2,1-8H3,(H,39,40,42,44)/t31-,33-,34-,35-/m1/s1
• Isomeric SMILES: CC(=O)NC1=NC(=O)N(C=C1)[C@H]2[C@@H]([C@@H]([C@H](O2)COC(C3=CC=CC=C3)(C4=CC=C(C=C4)OC)C5=CC=C(C=C5)OC)O)O[Si](C)(C)C(C)(C)C
• Alternate CAS: 121058-85-3
• Molecular Weight: 701.89

Taxonomic Classification

Taxonomy Tree

• Kingdom Organic compounds
  • Superclass Benzenoids
    • Class Triphenyl compounds

• Kingdom: Organic compounds
• Superclass: Benzenoids
• Class: Triphenyl compounds
• Subclass: Not available
• Intermediate Tree Nodes: Not available
• Direct Parent: Triphenyl compounds
• Alternative Parents: Pyrimidine nucleosides Glycosylamines Pentoses Benzylethers N-acetylarylamines Anisoles Phenoxy compounds Methoxybenzenes Alkyl aryl ethers Pyrimidones Hydropyrimidines Imidolactams Acetamides Trialkylheterosilanes Heteroaromatic compounds Oxolanes Silyl ethers Secondary carboxylic acid amides Secondary alcohols Dialkyl ethers Azacyclic compounds Oxacyclic compounds Organic metalloid salts Carbonyl compounds Hydrocarbon derivatives Organic oxides Organopnictogen compounds
• Molecular Framework: Aromatic heteromonocyclic compounds
• Substituents: Triphenyl compound - Pyrimidine nucleoside - Glycosyl compound - N-glycosyl compound - Pentose monosaccharide - Benzylether - N-acetylarylamine - Anisole - Phenoxy compound - Phenol ether - N-arylamide - Methoxybenzene - Alkyl aryl ether - Pyrimidone - Monocyclic benzene moiety - Imidolactam - Hydropyrimidine - Pyrimidine - Monosaccharide - Acetamide - Heteroaromatic compound - Trialkylheterosilane - Oxolane - Carboxamide group - Silyl ether - Secondary carboxylic acid amide - Secondary alcohol - Azacycle - Oxacycle - Organic metalloid salt - Organoheterocyclic compound - Carboxylic acid derivative - Dialkyl ether - Ether - Organoheterosilane - Organopnictogen compound - Carbonyl group - Organic oxygen compound - Organic nitrogen compound - Organosilicon compound - Alcohol - Hydrocarbon derivative - Organic metalloid moeity - Organonitrogen compound - Organooxygen compound - Organic oxide - Aromatic heteromonocyclic compound
• Description: This compound belongs to the class of organic compounds known as triphenyl compounds. These are aromatic compounds containing a triphenyl moiety.
• External Descriptors: Not available

Data sources

1. Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS. ClassyFire: Automated Chemical Classification With A Comprehensive, Computable Taxonomy. Journal of Cheminformatics, 2016, 8:61.

DOI: 10.1186/s13321-016-0174-y

Chemical and Physical Properties

• Solubility: DMSO : 100 mg/mL (142.47 mM; Need ultrasonic)
• Sensitivity: Light & Moisture & Air sensitive
• Molecular Weight: 701.900 g/mol
• Hydrogen Bond Donor Count: 2
• Hydrogen Bond Acceptor Count: 8
• Rotatable Bond Count: 13
• Exact Mass: 701.313 Da
• Monoisotopic Mass: 701.313 Da
• Topological Polar Surface Area: 128.000 Ų
• Heavy Atom Count: 50
• Formal Charge: 0
• Complexity: 1190.000
• Isotope Atom Count: 0
• Defined Atom Stereocenter Count: 4
• Undefined Atom Stereocenter Count: 0
• Defined Bond Stereocenter Count: 0
• Undefined Bond Stereocenter Count: 0
• The total count of all stereochemical bonds: 0
• Covalently-Bonded Unit Count: 1

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