(1R,2S,3R)-3-(6-amino-9H-purin-9-yl)cyclopentane-1,2-diol , CAS No.125409-63-4

CAS: 125409-63-4 Cat. No.: R667966 Molecular Weight: 235.24 PubChem CID: 73651
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Synonyms
(1R,2S,3R)-3-(6-amino-9H-purin-9-yl)cyclopentane-1,2-diol | DHCaA | (1R,2S,3R)-3-(6-aminopurin-9-yl)cyclopentane-1,2-diol | 3-(6-amino-9H-purin-9-yl)cyclopentane-1,2-diol | 9-(2',3'-Dihydroxycyclopentan-1'-yl)adenine | DTXSID00925128 | CZASVOKHBMDKGF-JKMU
Storage
Room temperature
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1mg
R667966-1mg
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5mg
R667966-5mg
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$1,999.90

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Why this grade

for sensitive chromatographic and analytical workflows requiring minimal baseline interference.

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Storage & shipping

Room temperature Ships Check lot-specific COA for exact specifications.

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Quality documents

SDS, COA, datasheet, and spec sheet available for download. Lot-specific COA accessible via lot number lookup.

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Literature proof

Cited in 0 peer-reviewed publications across chromatography, organic synthesis, and cross-coupling reactions.

Specifications

Synonyms
(1R, 2S, 3R)-3-(6-amino-9H-purin-9-yl)cyclopentane-1, 2-diol | DHCaA | (1R, 2S, 3R)-3-(6-aminopurin-9-yl)cyclopentane-1, 2-diol | 3-(6-amino-9H-purin-9-yl)cyclopentane-1, 2-diol | 9-(2', 3'-Dihydroxycyclopentan-1'-yl)adenine | DTXSID00925128 | CZASVOKHBMDKGF-JKMU
Storage
Room temperature
Product Properties
ALogP-0.8
Names and Identifiers
Canonical SmilesC1CC(C(C1N2C=NC3=C(N=CN=C32)N)O)O
IUPAC Name(1R,2S,3R)-3-(6-aminopurin-9-yl)cyclopentane-1,2-diol
InChIKeyCZASVOKHBMDKGF-JKMUOGBPSA-N
INCHI1S/C10H13N5O2/c11-9-7-10(13-3-12-9)15(4-14-7)5-1-2-6(16)8(5)17/h3-6,8,16-17H,1-2H2,(H2,11,12,13)/t5-,6-,8+/m1/s1
Isomeric SMILES C1C[C@H]([C@H]([C@@H]1N2C=NC3=C(N=CN=C32)N)O)O
PubChem CID 73651
Molecular Weight 235.24

Documentation

📋 Safety Data Sheet (SDS)

Comprehensive hazard, handling, storage, and regulatory compliance document.

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✅ Certificate of Analysis (COA)

Lot-specific quality data. Enter your lot number to retrieve the exact COA.

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📊 Datasheet

Quick-reference summary of product specifications and applications.

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🔬 Specification Sheet

Full quality attributes and acceptance criteria for this grade.

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Advanced Data

Taxonomic Classification

Taxonomy Tree

KingdomOrganic compounds
SuperclassNucleosides, nucleotides, and analogues
ClassNucleoside and nucleotide analogues
SubclassCyclopentyl nucleosides
Intermediate Tree Nodes 1,3-substituted cyclopentyl nucleosides
Direct Parent1,3-substituted cyclopentyl purine nucleosides
Alternative Parents 6-aminopurines  Aminopyrimidines and derivatives  N-substituted imidazoles  Imidolactams  Cyclopentanols  Heteroaromatic compounds  Cyclic alcohols and derivatives  1,2-diols  Azacyclic compounds  Primary amines  Organopnictogen compounds  Hydrocarbon derivatives  
Molecular FrameworkAromatic heteropolycyclic compounds
Substituents 1,3-substituted cyclopentyl purine nucleoside - 6-aminopurine - Imidazopyrimidine - Purine - Aminopyrimidine - Cyclopentanol - N-substituted imidazole - Pyrimidine - Imidolactam - Azole - Cyclic alcohol - Imidazole - Heteroaromatic compound - 1,2-diol - Secondary alcohol - Azacycle - Organoheterocyclic compound - Organooxygen compound - Organonitrogen compound - Amine - Hydrocarbon derivative - Alcohol - Organopnictogen compound - Organic nitrogen compound - Organic oxygen compound - Primary amine - Aromatic heteropolycyclic compound
DescriptionThis compound belongs to the class of organic compounds known as 1,3-substituted cyclopentyl purine nucleosides. These are nucleoside analogues with a structure that consists of a cyclobutane that is substituted a the 1-position with a hydroxyl group and at the 3-position with either a purine base.
External Descriptors Not available
3D Structure
Interactive Chemical Structure Model





Associated Targets(Human)
AHCY Tchem Adenosylhomocysteinase (3 Activities)
Activity TypeActivity Value -log(M)Mechanism of ActionActivity ReferencePublications (PubMed IDs)
HepG2 (196354 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Associated Targets(non-human)
Ahcy Adenosylhomocysteinase (45 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Salmonella typhi (4293 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
rep Replicase polyprotein 1ab (378 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
SARS-CoV-2 (38078 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Mechanisms of Action
Certificates(CoA,COO,BSE/TSE and Analysis Chart)
C of A & Other Certificates(BSE/TSE, COO):
Analytical Chart:
Chemical and Physical Properties
Molecular Weight235.240 g/mol
XLogP3-0.800
Hydrogen Bond Donor Count3
Hydrogen Bond Acceptor Count6
Rotatable Bond Count1
Exact Mass235.107 Da
Monoisotopic Mass235.107 Da
Topological Polar Surface Area110.000 Ų
Heavy Atom Count17
Formal Charge0
Complexity292.000
Isotope Atom Count0
Defined Atom Stereocenter Count3
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count0
Undefined Bond Stereocenter Count0
The total count of all stereochemical bonds0
Covalently-Bonded Unit Count1
Solution Calculators
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