Pyrimidine 2'-deoxyribonucleosides

Description:

Compounds consisting of a pyrimidine linked to a ribose which lacks a hydroxyl group at position 2.

Ancestors:

Organic compounds ⮕ Nucleosides, nucleotides, and analogues ⮕ Pyrimidine nucleosides ⮕ Pyrimidine 2'-deoxyribonucleosides

Popular Products

N(3)-methyl-2'-deoxycytidine
CAS: 22882-02-6 PubChem CID: 3081452

≥98%

Out of Stock Item #: N1298043

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IUPAC Name

1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-4-(methylamino)pyrimidin-2-one

SMILES

CNC1=NC(=O)N(C=C1)C2CC(C(O2)CO)O

InChIKey
DNYQNXJGNKQOQK-LKEWCRSYSA-N

InChI

1S/C10H15N3O4/c1-11-8-2-3-13(10(16)12-8)9-4-6(15)7(5-14)17-9/h2-3,6-7,9,14-15H,4-5H2,1H3,(H,11,12,16)/t6-,7+,9+/m0/s1
2'-Azido-2'-deoxycytidine
CAS: 51034-68-5 PubChem CID: 93258 Formula: C₉H₁₂N₆O₄ Molecular Weight: 268.2

≥98%

Out of Stock Item #: A1339046

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IUPAC Name

4-amino-1-[(2R,3R,4S,5R)-3-azido-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one

SMILES

C1=CN(C(=O)N=C1N)C2C(C(C(O2)CO)O)N=[N+]=[N-]

InChIKey
FEOYKPQEERVCAV-XVFCMESISA-N

InChI

1S/C9H12N6O4/c10-5-1-2-15(9(18)12-5)8-6(13-14-11)7(17)4(3-16)19-8/h1-2,4,6-8,16-17H,3H2,(H2,10,12,18)/t4-,6-,7-,8-/m1/s1
Cytidine, 2'-deoxy-5-formyl-
CAS: 137017-45-9 PubChem CID: 15081828

≥99%

Out of Stock Item #: C1312568

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IUPAC Name

4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-2-oxopyrimidine-5-carbaldehyde

SMILES

C1C(C(OC1N2C=C(C(=NC2=O)N)C=O)CO)O

InChIKey
QBADNGFALQJSIH-XLPZGREQSA-N

InChI

1S/C10H13N3O5/c11-9-5(3-14)2-13(10(17)12-9)8-1-6(16)7(4-15)18-8/h2-3,6-8,15-16H,1,4H2,(H2,11,12,17)/t6-,7+,8+/m0/s1
4-Amino-1-[3,3-difluoro-4-hydroxy-5-(hydroxymethyl)-2-oxolanyl]-2-pyrimidinone hydrochloride
CAS: 122111-05-1 PubChem CID: 46781465 Formula: C₉H₁₂ClF₂N₃O₄ Molecular Weight: 299.66

Out of Stock Item #: A1325626

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IUPAC Name

4-amino-1-[(2S,4S,5R)-3,3-difluoro-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidin-2-one;hydrochloride

SMILES

C1=CN(C(=O)N=C1N)C2C(C(C(O2)CO)O)(F)F.Cl

InChIKey
OKKDEIYWILRZIA-DNSZWREKSA-N

InChI

1S/C9H11F2N3O4.ClH/c10-9(11)6(16)4(3-15)18-7(9)14-2-1-5(12)13-8(14)17;/h1-2,4,6-7,15-16H,3H2,(H2,12,13,17);1H/t4-,6+,7+;/m1./s1
1-[4-Hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione
CAS: 16053-52-4 PubChem CID: 1134

≥99%

Out of Stock Item #: H1073604

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IUPAC Name

1-[4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione

SMILES

CC1=CN(C(=O)NC1=O)C2CC(C(O2)CO)O

InChIKey
IQFYYKKMVGJFEH-UHFFFAOYSA-N

InChI

1S/C10H14N2O5/c1-5-3-12(10(16)11-9(5)15)8-2-6(14)7(4-13)17-8/h3,6-8,13-14H,2,4H2,1H3,(H,11,15,16)
Thymectacin
CAS: 232925-18-7 Formula: C₂₁H₂₅BrN₃O₉P Molecular Weight: 574.3

≥98%

Out of Stock Item #: T1307805

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IUPAC Name

methyl (2S)-2-[[[(2R,3S,5R)-5-[5-[(E)-2-bromoethenyl]-2,4-dioxopyrimidin-1-yl]-3-hydroxyoxolan-2-yl]methoxy-phenoxyphosphoryl]amino]propanoate

SMILES

C[C@@H](C(=O)OC)NP(=O)(OC[C@@H]1[C@H](C[C@@H](O1)N2C=C(C(=O)NC2=O)/C=C/Br)O)OC3=CC=CC=C3

InChIKey
CFBLUORPOFELCE-BACVZHSASA-N

InChI

1S/C21H25BrN3O9P/c1-13(20(28)31-2)24-35(30,34-15-6-4-3-5-7-15)32-12-17-16(26)10-18(33-17)25-11-14(8-9-22)19(27)23-21(25)29/h3-9,11,13,16-18,26H,10,12Hshow more
5-Azidomethyl-2'-deoxyuridine
CAS: 59090-48-1 PubChem CID: 188215

≥99%

Out of Stock Item #: A1006536

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IUPAC Name

5-(azidomethyl)-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione

SMILES

C1C(C(OC1N2C=C(C(=O)NC2=O)CN=[N+]=[N-])CO)O

InChIKey
JKSAKMHLWMCADM-XLPZGREQSA-N

InChI

1S/C10H13N5O5/c11-14-12-2-5-3-15(10(19)13-9(5)18)8-1-6(17)7(4-16)20-8/h3,6-8,16-17H,1-2,4H2,(H,13,18,19)/t6-,7+,8+/m0/s1
5,6-Dihydrothymidine
CAS: 5627-00-9 PubChem CID: 165328 Formula: C₁₀H₁₆N₂O₅ Molecular Weight: 244.24

Out of Stock Item #: D1352559

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IUPAC Name

1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-methyl-1,3-diazinane-2,4-dione

SMILES

CC1CN(C(=O)NC1=O)C2CC(C(O2)CO)O

InChIKey
FEYHMSUYKIMUAL-UNYLCCJPSA-N

InChI

1S/C10H16N2O5/c1-5-3-12(10(16)11-9(5)15)8-2-6(14)7(4-13)17-8/h5-8,13-14H,2-4H2,1H3,(H,11,15,16)/t5?,6-,7+,8+/m0/s1
4-Thio-2'-deoxyuridine
CAS: 5580-20-1 PubChem CID: 3034650 Formula: C₉H₁₂N₂O₄S Molecular Weight: 244.27

≥98%

Out of Stock Item #: T1326011

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IUPAC Name

1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-4-sulfanylidenepyrimidin-2-one

SMILES

C1C(C(OC1N2C=CC(=S)NC2=O)CO)O

InChIKey
PHNDUXLWAVSUAL-SHYZEUOFSA-N

InChI

1S/C9H12N2O4S/c12-4-6-5(13)3-8(15-6)11-2-1-7(16)10-9(11)14/h1-2,5-6,8,12-13H,3-4H2,(H,10,14,16)/t5-,6+,8+/m0/s1
2'-F-Ac-dC
CAS: 159414-97-8 Formula: C₁₁H₁₄FN₃O₅ Molecular Weight: 287.25

Solid Suitable for molecular biology ? for DNA synthesis ? ≥98%

In Stock Item #: N777572

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IUPAC Name

N-[1-[(2R,3R,4R,5R)-3-fluoro-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-2-oxopyrimidin-4-yl]acetamide

SMILES

CC(=O)NC1=NC(=O)N(C=C1)C2C(C(C(O2)CO)O)F

InChIKey
NLXVKEFNBVLDLD-PEBGCTIMSA-N

InChI

1S/C11H14FN3O5/c1-5(17)13-7-2-3-15(11(19)14-7)10-8(12)9(18)6(4-16)20-10/h2-3,6,8-10,16,18H,4H2,1H3,(H,13,14,17,19)/t6-,8-,9-,10-/m1/s1

Synonyms
N-Acetyl-2′-deoxy-2′-fluorocytidine; N4-Acetyl-2'-fluoro-2'-deoxycytidine | N4-Acetyl-2'-deoxy-2'-fluorocytidine; N-[...
Cytidine， 2'-deoxy-5-(trifluoromethyl)-
CAS: 66384-66-5 PubChem CID: 125618 Formula: C₁₀H₁₂F₃N₃O₄ Molecular Weight: 295.22

≥95%

Out of Stock Item #: C769750

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IUPAC Name

4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-(trifluoromethyl)pyrimidin-2-one

SMILES

C1C(C(OC1N2C=C(C(=NC2=O)N)C(F)(F)F)CO)O

InChIKey
XNSPCSMIPDACTB-RRKCRQDMSA-N

InChI

1S/C10H12F3N3O4/c11-10(12,13)4-2-16(9(19)15-8(4)14)7-1-5(18)6(3-17)20-7/h2,5-7,17-18H,1,3H2,(H2,14,15,19)/t5-,6+,7+/m0/s1
N4-Benzoyl-5'-O-tert-butyldimethylsilyl-2'-deoxycytidine
CAS: 51549-36-1 PubChem CID: 14018201

≥97%

Out of Stock Item #: N769255

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IUPAC Name

N-[1-[(2R,4S,5R)-5-[[tert-butyl(dimethyl)silyl]oxymethyl]-4-hydroxyoxolan-2-yl]-2-oxopyrimidin-4-yl]benzamide

SMILES

CC(C)(C)[Si](C)(C)OCC1C(CC(O1)N2C=CC(=NC2=O)NC(=O)C3=CC=CC=C3)O

InChIKey
CCPOWNJNXQQIFV-YQVWRLOYSA-N

InChI

1S/C22H31N3O5Si/c1-22(2,3)31(4,5)29-14-17-16(26)13-19(30-17)25-12-11-18(24-21(25)28)23-20(27)15-9-7-6-8-10-15/h6-12,16-17,19,26H,13-14H2,1-5H3,(H,23,2show more

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