Cytidine 5'-Diphosphate Trisodium Salt Hydrate - ≥95% , CAS No.34393-59-4

CAS: 34393-59-4 Cat. No.: C122987 Molecular Weight: 469.12 EC Number: 251-990-8 PubChem CID: 23519589

GRADE & PURITY ≥95%

Synonyms

J-700170 | starbld0004842 | CYTIDINE-5'-DIPHOSPHATE TRISODIUM SALT | AC-32149 | sodium cytidine diphosphate | trisodium ({[(2R,3S,4R,5R)-5-(4-amino-2-oxo-1,2-dihydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methyl phosphonato}oxy)phosphonate | trisodium;[[

Storage

Store at -20°C,Argon charged

Shipped In

Ice chest + Ice pads

Overview

It is used as a substrate of CDP (nucleoside diphosphate) kinase (2.7.4.6) to produce CTP in support ofDNA and RNA biosynthesis and of ribonucleotide reductase to product dCMP.

Specifications

Synonyms

J-700170 | starbld0004842 | CYTIDINE-5'-DIPHOSPHATE TRISODIUM SALT | AC-32149 | sodium cytidine diphosphate | trisodium ({[(2R, 3S, 4R, 5R)-5-(4-amino-2-oxo-1, 2-dihydropyrimidin-1-yl)-3, 4-dihydroxyoxolan-2-yl]methyl phosphonato}oxy)phosphonate | trisodium;[[

Specifications & Purity

≥95%

Biochemical and Physiological Mechanisms

CDP (nucleoside diphosphate) kinase substrate to produce CTP in support of DNA and RNA biosynthesis. Ribonucleotide reductase substrate to produce dCMP.

Storage

Store at -20°C, Argon charged

Shipped In

Ice chest + Ice pads

This product requires cold chain shipping. Ground and other economy services are not available.

Note

Wherever possible, you should prepare and use solutions on the same day. However, if you need to make up stock solutions in advance, we recommend that you store the solution as aliquots in tightly sealed vials at -20°C. Generally, these will be useable for up to one month. Before use, and prior to opening the vial we recommend that you allow your product to equilibrate to room temperature for at least 1 hour. Need more advice on solubility, usage and handling? Please visit our frequently asked questions (FAQ) page for more details.

Purity

≥95%

Names and Identifiers

• Canonical Smiles: C1=CN(C(=O)N=C1N)C2C(C(C(O2)COP(=O)([O-])OP(=O)([O-])[O-])O)O.[Na+].[Na+].[Na+]
• IUPAC Name: trisodium;[[(2R,3S,4R,5R)-5-(4-amino-2-oxopyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-oxidophosphoryl] phosphate
• InChIKey: JENUKVZGXGULDX-LLWADOMFSA-K
• INCHI: 1S/C9H15N3O11P2.3Na/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18;;;/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H2,10,11,15)(H2,16,17,18);;;/q;3*+1/p-3/t4-,6-,7-,8-;;;/m1.../s1
• Isomeric SMILES: C1=CN(C(=O)N=C1N)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)([O-])OP(=O)([O-])[O-])O)O.[Na+].[Na+].[Na+]
• PubChem CID: 23519589
• Molecular Weight: 469.12

Taxonomic Classification

Taxonomy Tree

• Kingdom Organic compounds
  • Superclass Nucleosides, nucleotides, and analogues
    • Class Pyrimidine nucleotides
      • Subclass Pyrimidine ribonucleotides

• Kingdom: Organic compounds
• Superclass: Nucleosides, nucleotides, and analogues
• Class: Pyrimidine nucleotides
• Subclass: Pyrimidine ribonucleotides
• Intermediate Tree Nodes: Not available
• Direct Parent: Pyrimidine ribonucleoside diphosphates
• Alternative Parents: Pentose phosphates Glycosylamines Monosaccharide phosphates Organic pyrophosphates Pyrimidones Aminopyrimidines and derivatives Alkyl phosphates Hydropyrimidines Imidolactams Oxolanes Heteroaromatic compounds Secondary alcohols 1,2-diols Oxacyclic compounds Azacyclic compounds Organic zwitterions Hydrocarbon derivatives Primary amines Organic sodium salts Organic oxides
• Molecular Framework: Aromatic heteromonocyclic compounds
• Substituents: Pyrimidine ribonucleoside diphosphate - Pentose-5-phosphate - Pentose phosphate - Glycosyl compound - N-glycosyl compound - Pentose monosaccharide - Monosaccharide phosphate - Organic pyrophosphate - Aminopyrimidine - Pyrimidone - Phosphoric acid ester - Hydropyrimidine - Pyrimidine - Monosaccharide - Imidolactam - Organic phosphoric acid derivative - Alkyl phosphate - Heteroaromatic compound - Oxolane - 1,2-diol - Secondary alcohol - Oxacycle - Azacycle - Organic alkali metal salt - Organoheterocyclic compound - Organonitrogen compound - Organic oxygen compound - Organic sodium salt - Amine - Alcohol - Organic nitrogen compound - Hydrocarbon derivative - Organic oxide - Organooxygen compound - Organic salt - Organic zwitterion - Primary amine - Aromatic heteromonocyclic compound
• Description: This compound belongs to the class of organic compounds known as pyrimidine ribonucleoside diphosphates. These are pyrimidine ribonucleotides with diphosphate group linked to the ribose moiety.
• External Descriptors: Not available

Data sources

1. Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS. ClassyFire: Automated Chemical Classification With A Comprehensive, Computable Taxonomy. Journal of Cheminformatics, 2016, 8:61.

DOI: 10.1186/s13321-016-0174-y

Chemical and Physical Properties

• Solubility: Freely soluble in water, insoluble in ethanol, chloroform and ether
• Sensitivity: Moisture & Heat sensitive
• Molecular Weight: 469.120 g/mol
• Hydrogen Bond Donor Count: 3
• Hydrogen Bond Acceptor Count: 11
• Rotatable Bond Count: 5
• Exact Mass: 468.964 Da
• Monoisotopic Mass: 468.964 Da
• Topological Polar Surface Area: 230.000 Ų
• Heavy Atom Count: 28
• Formal Charge: 0
• Complexity: 671.000
• Isotope Atom Count: 0
• Defined Atom Stereocenter Count: 4
• Undefined Atom Stereocenter Count: 0
• Defined Bond Stereocenter Count: 0
• Undefined Bond Stereocenter Count: 0
• The total count of all stereochemical bonds: 0
• Covalently-Bonded Unit Count: 4

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