E3330 - ≥97% , DNA-(apurinic or apyrimidinic site) lyase inhibitor, CAS No.136164-66-4, DNA-(apurinic or apyrimidinic site) lyase inhibitor

CAS: 136164-66-4 Cat. No.: E413754 Molecular Weight: 378.46 EC Number: 693-030-4
AVAILABLE TO ORDER
GRADE & PURITY ≥97%
Synonyms
E3330 | E-3330 | EX-A2212 | Undecanoic acid, 2-((4,5-dimethoxy-2-methyl-3,6-dioxo-1,4-cyclohexadien-1-yl)methylene)-, (E)- | (2E)-2-[(4,5-Dimethoxy-2-methyl-3,6-dioxo-1,4-cyclohexadien-1-yl)methylene]undecanoic acid | (2E)-2-[(4,5-Dimethoxy-2-methyl-3,6-d
Storage
Store at -20°C
Shipped In
Ice chest + Ice pads
 ·  off list, applied to all prices below.
Size
Status
Price
Qty
5mg
E413754-5mg
4
$127.90
25mg
E413754-25mg
2
$382.90
50mg
E413754-50mg
1
$696.90
100mg
E413754-100mg
1
$1,218.90
250mg
E413754-250mg
1
$1,999.90
Enter a quantity for the sizes you want to add.
🧪

Why this grade

≥97% for sensitive chromatographic and analytical workflows requiring minimal baseline interference.

🌡

Storage & shipping

Store at -20°C Ships Ice chest + Ice pads Check lot-specific COA for exact specifications.

📋

Quality documents

SDS, COA, datasheet, and spec sheet available for download. Lot-specific COA accessible via lot number lookup.

📚

Literature proof

Cited in 0 peer-reviewed publications across chromatography, organic synthesis, and cross-coupling reactions.

Overview

Product Describtion:

E3330 (APX-3330) is a direct, orally active and selective inhibitor of Ape-1 (apurinic/apyrimidinic endonuclease 1)/Ref-1 (redox factor-1) redox. E3330 is able to impair tumor growth and blocks the activity of NF-κB, AP-1, and HIF-1α in pancreatic cancer. E3330 shows anticancer activities.


Information

E3330 E3330 (APX-3330) is a potent and selective APE1(Ref-1) inhibitor, which suppressed NF-kappa B DNA-binding activity.


Targets

NF-κB ; APE1(Ref-1)


In vitro

E3330 affects hemangioblast development in vitro via inhibition of Ape1 redox activity. E3330 inhibits the growth of human pancreatic cancer cell line PANC1, XPA1, MIAPACA, BxPC3, and PK9. E3330 also promotes exit of cell cycle in PANC1 cells, inhibits the DNA-Binding activity of HIF-1α and migration of pancreatic cancer cells. In JHH6 cells, E3330 prevents the functional activation of NF-κB via the alteration of APE1 subcellular trafficking and reduces IL-6 and IL-8 expression induced by TNF-α and FAs accumulation through blockage of the redox-mediated activation of NF-κB.


In vivo

In mice with endotoxin-mediated hepatitis, E3330 (300 mg/kg, p.o.) attenuates the elevation of plasma tumor necrosis factor activity and protectes mice from liver injury. In Rat model, E3330 (100 mg/kg, p.o.) also protectes rats from severe liver injury induced with endotoxin plus galactosamine.


Cell Research(from reference)

Cell lines:PANC1 cells 

Concentrations:~30 μM 

Incubation Time:72 hours 

Specifications

Synonyms
E3330 | E-3330 | EX-A2212 | Undecanoic acid, 2-((4, 5-dimethoxy-2-methyl-3, 6-dioxo-1, 4-cyclohexadien-1-yl)methylene)-, (E)- | (2E)-2-[(4, 5-Dimethoxy-2-methyl-3, 6-dioxo-1, 4-cyclohexadien-1-yl)methylene]undecanoic acid | (2E)-2-[(4, 5-Dimethoxy-2-methyl-3, 6-d
Specifications & Purity
≥97%
Biochemical and Physiological Mechanisms
E3330 (APX-3330) is a potent and selective APE1(Ref-1) inhibitor, which suppressed NF-kappa B DNA-binding activity.
Storage
Store at -20°C
Shipped In
Ice chest + Ice pads
This product requires cold chain shipping. Ground and other economy services are not available.
Action Type
INHIBITOR
Mechanism of action
DNA-(apurinic or apyrimidinic site) lyase inhibitor
Purity
≥97%
Product Properties
ALogP5.3
Names and Identifiers
Pubchem Sid504764185
Pubchem Sid Urlhttps://pubchem.ncbi.nlm.nih.gov/substance/504764185
Canonical SmilesCCCCCCCCCC(=CC1=C(C(=O)C(=C(C1=O)OC)OC)C)C(=O)O
IUPAC Name(2E)-2-[(4,5-dimethoxy-2-methyl-3,6-dioxocyclohexa-1,4-dien-1-yl)methylidene]undecanoic acid
InChIKeyAALSSIXXBDPENJ-FYWRMAATSA-N
INCHI1S/C21H30O6/c1-5-6-7-8-9-10-11-12-15(21(24)25)13-16-14(2)17(22)19(26-3)20(27-4)18(16)23/h13H,5-12H2,1-4H3,(H,24,25)/b15-13+
Isomeric SMILES CCCCCCCCC/C(=C\C1=C(C(=O)C(=C(C1=O)OC)OC)C)/C(=O)O
Molecular Weight 378.46
Reaxy-Rn 24609616
Reaxys-RN_link_address https://www.reaxys.com/reaxys/secured/hopinto.do?context=S&query=IDE.XRN=24609616&ln=

Documentation

📋 Safety Data Sheet (SDS)

Comprehensive hazard, handling, storage, and regulatory compliance document.

Download SDS →

✅ Certificate of Analysis (COA)

Lot-specific quality data. Enter your lot number to retrieve the exact COA.

Look up COA →

📊 Datasheet

Quick-reference summary of product specifications and applications.

View datasheet →

🔬 Specification Sheet

Full quality attributes and acceptance criteria for this grade.

View spec sheet →

Advanced Data

Taxonomic Classification

Taxonomy Tree

KingdomOrganic compounds
SuperclassLipids and lipid-like molecules
ClassPrenol lipids
SubclassQuinone and hydroquinone lipids
Intermediate Tree Nodes Prenylquinones
Direct ParentUbiquinones
Alternative Parents P-benzoquinones  Medium-chain fatty acids  Methyl-branched fatty acids  Unsaturated fatty acids  Vinylogous esters  Monocarboxylic acids and derivatives  Carboxylic acids  Organic oxides  Hydrocarbon derivatives  
Molecular FrameworkAliphatic homomonocyclic compounds
Substituents Ubiquinone skeleton - P-benzoquinone - Quinone - Medium-chain fatty acid - Branched fatty acid - Methyl-branched fatty acid - Fatty acyl - Fatty acid - Unsaturated fatty acid - Vinylogous ester - Ketone - Cyclic ketone - Monocarboxylic acid or derivatives - Carboxylic acid - Carboxylic acid derivative - Hydrocarbon derivative - Organic oxide - Organooxygen compound - Carbonyl group - Organic oxygen compound - Aliphatic homomonocyclic compound
DescriptionThis compound belongs to the class of organic compounds known as ubiquinones. These are coenzyme Q derivatives containing a 5, 6-dimethoxy-3-methyl(1,4-benzoquinone) moiety to which an isoprenyl group is attached at ring position 2(or 6).
External Descriptors Not available
3D Structure
Interactive Chemical Structure Model





Associated Targets(Human)
APEX1 Tchem DNA-(apurinic or apyrimidinic site) lyase (1 Activities)
Activity TypeActivity Value -log(M)Mechanism of ActionActivity ReferencePublications (PubMed IDs)
Mechanisms of Action
Certificates(CoA,COO,BSE/TSE and Analysis Chart)
C of A & Other Certificates(BSE/TSE, COO):
Analytical Chart:

Find and download the COA for your product by matching the lot number on the packaging.

11 results found

Lot NumberCertificate TypeDateItem
G23121170Certificate of AnalysisApr 07, 2026 E413754
G23121173Certificate of AnalysisApr 07, 2026 E413754
G23121174Certificate of AnalysisApr 07, 2026 E413754
G23121178Certificate of AnalysisApr 07, 2026 E413754
G23121200Certificate of AnalysisApr 07, 2026 E413754
G23121211Certificate of AnalysisApr 07, 2026 E413754
G23121212Certificate of AnalysisApr 07, 2026 E413754
G23121216Certificate of AnalysisApr 07, 2026 E413754
G23121222Certificate of AnalysisApr 07, 2026 E413754
G23121176Certificate of AnalysisJun 14, 2023 E413754
H2504045Certificate of AnalysisJun 14, 2023 E413754

Show more ⌵

Chemical and Physical Properties
SolubilitySolubility (25°C) In vitro DMSO: 100 mg/mL (264.22 mM); Ethanol: 75 mg/mL (198.17 mM); Water: Insoluble;
Molecular Weight378.500 g/mol
XLogP35.300
Hydrogen Bond Donor Count1
Hydrogen Bond Acceptor Count6
Rotatable Bond Count12
Exact Mass378.204 Da
Monoisotopic Mass378.204 Da
Topological Polar Surface Area89.900 Ų
Heavy Atom Count27
Formal Charge0
Complexity666.000
Isotope Atom Count0
Defined Atom Stereocenter Count0
Undefined Atom Stereocenter Count0
Defined Bond Stereocenter Count1
Undefined Bond Stereocenter Count0
The total count of all stereochemical bonds1
Covalently-Bonded Unit Count1
Solution Calculators
Reviews

Customer Reviews

Shall we send you a message when we have discounts available?

Remind me later

Thank you! Please check your email inbox to confirm.

Oops! Notifications are disabled.